RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 CLSTN3Q9BQT9 956 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 DRGXA6NNA5 263 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 ALPPL2P10696 532 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 CLCNKAP51800 687 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 DTWD1Q8N5C7 304 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 CNIH3Q8TBE1 160 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 HSH2DQ96JZ2 352 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 CASD1Q96PB1 797 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 IL17FQ96PD4 163 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 PREBQ9HCU5 417 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 CCNB1IP1Q9NPC3 277 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 VAPAQ9P0L0 249 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 NDOR1Q9UHB4 597 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 THSD7AQ9UPZ6 1657 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 PLK4O00444 970 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 ARHGEF9O43307 516 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 ARF5P84085 180 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 RSPO2Q6UXX9 243 aaPredicted RBP15.23■□□□□ 0.03
CUX1-211ENST00000546411 LRRC70Q7Z2Q7 622 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 HMGN2P46Q86SG4 172 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 CDK20Q8IZL9 346 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 LMNTD1Q8N9Z9 388 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 GPR26Q8NDV2 337 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 RNFT2Q96EX2 444 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 PYURFQ96I23 114 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 TRMT61BQ9BVS5 477 aaKnown RBP15.23■□□□□ 0.03
CUX1-211ENST00000546411 PHPT1Q9NRX4 125 aaPredicted RBP15.23■□□□□ 0.03
CUX1-211ENST00000546411 ITM2BQ9Y287 266 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 NCKAP1Q9Y2A7 1128 aa15.23■□□□□ 0.03
CUX1-211ENST00000546411 RP1L1Q8IWN7 2480 aaPredicted RBP15.23■□□□□ 0.03
CUX1-211ENST00000546411 ABHD14A-ACY1A0A1B0GW23 586 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 ZW10O43264 779 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 PI15O43692 258 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 GADD45GO95257 159 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 VIPR1P32241 457 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 CLCN4P51793 760 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 ZNF140P52738 457 aaPredicted RBP15.22■□□□□ 0.03
CUX1-211ENST00000546411 PTPN5P54829 565 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 ABHD18Q0P651 414 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 TUBB3Q13509 450 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 IFI44LQ53G44 452 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 TRAF7Q6Q0C0 670 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 ZFAND4Q86XD8 727 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 ERI1Q8IV48 349 aaKnown RBP15.22■□□□□ 0.03
CUX1-211ENST00000546411 CYP4Z2PQ8N1L4 340 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 PXYLP1Q8TE99 480 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 GLOD5A6NK44 160 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 ADAMDEC1O15204 470 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 TGM5O43548 720 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 B4GALT3O60512 393 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 GUCY1B2O75343 617 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 CDH3P22223 829 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 DSC1Q08554 894 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 TIMM50Q3ZCQ8 353 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 CRTC1Q6UUV9 634 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 VITQ6UXI7 678 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 TICAM1Q8IUC6 712 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 ZCCHC10Q8TBK6 192 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 POF1BQ8WVV4 589 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 RAB8BQ92930 207 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 EGLN2Q96KS0 407 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 ZSCAN5AQ9BUG6 496 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 C1QTNF7Q9BXJ2 289 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 ELAC1Q9H777 363 aaKnown RBP15.22■□□□□ 0.03
CUX1-211ENST00000546411 UBAP1Q9NZ09 502 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 MAP10Q9P2G4 905 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 SHROOM3Q8TF72 1996 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 WASH4PA8MWX3 477 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 AIREO43918 545 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 SOCS5O75159 536 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 UGT2B17O75795 530 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 DNTTP04053 509 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 CTSEP14091 401 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 PTNP21246 168 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 STT3AP46977 705 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 KLHL12Q53G59 568 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 RFLNAQ6ZTI6 216 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 VTCN1Q7Z7D3 282 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 CLECL1Q8IZS7 167 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 NUS1Q96E22 293 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 PRRG3Q9BZD7 231 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 TNFRSF12AQ9NP84 129 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 ZCCHC3Q9NUD5 404 aaKnown RBP15.22■□□□□ 0.03
CUX1-211ENST00000546411 MRPS7Q9Y2R9 242 aaKnown RBP15.22■□□□□ 0.03
CUX1-211ENST00000546411 PRSS51A0A1B0GVH4 220 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 H3BNH8 94 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 FGF4P08620 206 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 DEFB103AP81534 67 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 DUOXA1Q1HG43 343 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 DPY19L1Q2PZI1 675 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 HSF5Q4G112 596 aaPredicted RBP15.22■□□□□ 0.03
CUX1-211ENST00000546411 TFGQ92734 400 aaPredicted RBP15.22■□□□□ 0.03
CUX1-211ENST00000546411 RELTQ969Z4 430 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 C1GALT1C1Q96EU7 318 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 COL21A1Q96P44 957 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 GULP1Q9UBP9 304 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 ZNF232Q9UNY5 417 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 OARD1Q9Y530 152 aa15.22■□□□□ 0.03
CUX1-211ENST00000546411 OAS3Q9Y6K5 1087 aaKnown RBP15.22■□□□□ 0.03
CUX1-211ENST00000546411 PRSS21Q9Y6M0 314 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms