RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.14□□□□□ -1.43
PRKDC-211ENST00000546304 UCK1Q9HA47 277 aa6.14□□□□□ -1.43
PRKDC-211ENST00000546304 SYTL2Q9HCH5 934 aa6.14□□□□□ -1.43
PRKDC-211ENST00000546304 ARGLU1Q9NWB6 273 aaPredicted RBP6.14□□□□□ -1.43
PRKDC-211ENST00000546304 DLL3Q9NYJ7 618 aa6.14□□□□□ -1.43
PRKDC-211ENST00000546304 EURLQ9NYK6 297 aa6.14□□□□□ -1.43
PRKDC-211ENST00000546304 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.14□□□□□ -1.43
PRKDC-211ENST00000546304 LRIT1Q9P2V4 623 aa6.14□□□□□ -1.43
PRKDC-211ENST00000546304 PLAAQ9Y263 795 aa6.14□□□□□ -1.43
PRKDC-211ENST00000546304 PCDHGA1Q9Y5H4 931 aa6.14□□□□□ -1.43
PRKDC-211ENST00000546304 NFS1Q9Y697 457 aa6.14□□□□□ -1.43
PRKDC-211ENST00000546304 COLEC10Q9Y6Z7 277 aa6.14□□□□□ -1.43
PRKDC-211ENST00000546304 MDC1Q14676 2089 aaKnown RBP6.13□□□□□ -1.43
PRKDC-211ENST00000546304 CELSR3Q9NYQ7 3312 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 APC2O95996 2303 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 ACACAQ13085 2346 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 IGHV1OR21-1A0A087WYE8 117 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 A0A087X1B8 175 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 UQCRHLA0A096LP55 91 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 A0A096LPK6 155 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 IQANK1A0A1B0GTG1 560 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 FAM221BA6H8Z2 402 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 KRT87PA6NCN2 255 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 PABPN1LA6NDY0 278 aaKnown RBP6.13□□□□□ -1.43
PRKDC-211ENST00000546304 MYO1CO00159 1063 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 RASGRF2O14827 1237 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 ZW10O43264 779 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 KDM1AO60341 852 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 UBOX5O94941 541 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 KCNK5O95279 499 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 C1orf105O95561 183 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 RPLP0P05388 317 aaKnown RBP6.13□□□□□ -1.43
PRKDC-211ENST00000546304 C8GP07360 202 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 UQCRHP07919 91 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 SNRPAP09012 282 aaKnown RBP6.13□□□□□ -1.43
PRKDC-211ENST00000546304 H2AFXP16104 143 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-211ENST00000546304 CYP2A7P20853 494 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 TPP2P29144 1249 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-211ENST00000546304 CRABP2P29373 138 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 TYK2P29597 1187 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 ALDH4A1P30038 563 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 PKLRP30613 574 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 SHMT2P34897 504 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 SLC26A3P40879 764 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 PPM1FP49593 454 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-211ENST00000546304 CSRP3P50461 194 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 RAB28P51157 221 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 IRF9Q00978 393 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 ZNF844Q08AG5 666 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 ABRQ12979 859 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 PRKG2Q13237 762 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 SPIDRQ14159 915 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 RASA2Q15283 850 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 PHKG1Q16816 387 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 PPP1R3AQ16821 1122 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 KRT71Q3SY84 523 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 BEND6Q5SZJ8 279 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-211ENST00000546304 LGSNQ5TDP6 509 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 FBXO38Q6PIJ6 1188 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 FRA10AC1Q70Z53 315 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 UBE2R2Q712K3 238 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-211ENST00000546304 OOSP2Q86WS3 158 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 RASGRP3Q8IV61 690 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 CENPLQ8N0S6 344 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-211ENST00000546304 RAB42Q8N4Z0 105 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 Q8N9G6 341 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-211ENST00000546304 FBXO15Q8NCQ5 510 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-211ENST00000546304 OR10G6Q8NH81 332 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 MAGEC3Q8TD91 643 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 MZB1Q8WU39 189 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 ANKRD49Q8WVL7 239 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 HNRNPLLQ8WVV9 542 aaKnown RBP6.13□□□□□ -1.43
PRKDC-211ENST00000546304 ZFPM2Q8WW38 1151 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 LCN9Q8WX39 176 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 RSC1A1Q92681 617 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 FERD3LQ96RJ6 166 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 RAB11FIP5Q9BXF6 653 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 TBC1D10AQ9BXI6 508 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 UNKQ9C0B0 810 aaKnown RBP6.13□□□□□ -1.43
PRKDC-211ENST00000546304 DERL2Q9GZP9 239 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 EPB41L1Q9H4G0 881 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 SPATA7Q9P0W8 599 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 TBK1Q9UHD2 729 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 CIDEBQ9UHD4 219 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 POLG2Q9UHN1 485 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 LGALS13Q9UHV8 139 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 IKZF3Q9UKT9 509 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 PLAGL1Q9UM63 463 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 ICKQ9UPZ9 632 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 APOBEC2Q9Y235 224 aaKnown RBP6.13□□□□□ -1.43
PRKDC-211ENST00000546304 TDRKHQ9Y2W6 561 aaKnown RBP6.13□□□□□ -1.43
PRKDC-211ENST00000546304 MN1Q10571 1320 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-211ENST00000546304 SPTBP11277 2137 aa6.13□□□□□ -1.43
PRKDC-211ENST00000546304 ANKRD11Q6UB99 2663 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-211ENST00000546304 A0A1W2PQM1 296 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 OR5K3A6NET4 321 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 GFYI3L273 518 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 CDC7O00311 574 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 CASC3O15234 703 aaKnown RBP6.12□□□□□ -1.43
PRKDC-211ENST00000546304 SLC16A5O15375 505 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms