RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 PTCHD3Q3KNS1 767 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 C16orf46Q6P387 395 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 FBXO42Q6P3S6 717 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 AGTRAPQ6RW13 159 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 CEP128Q6ZU80 1094 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 CCDC25Q86WR0 208 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 EXD3Q8N9H8 876 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 PPFIBP2Q8ND30 876 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 MED8Q96G25 268 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 HIST1H2AHQ96KK5 128 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 GPR22Q99680 433 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 RBBP8Q99708 897 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 HIST1H2AJQ99878 128 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 ZFYVE21Q9BQ24 234 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 SELENOSQ9BQE4 189 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 H2AFJQ9BTM1 129 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 SGPP1Q9BX95 441 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 CCDC177Q9NQR7 707 aaPredicted RBP11.37□□□□□ -0.59
YBX3-217ENST00000546164 IRAK4Q9NWZ3 460 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 UTP6Q9NYH9 597 aaKnown RBP11.37□□□□□ -0.59
YBX3-217ENST00000546164 TXNDC16Q9P2K2 825 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 DMGDHQ9UI17 866 aaKnown RBP11.37□□□□□ -0.59
YBX3-217ENST00000546164 SNX7Q9UNH6 387 aa11.37□□□□□ -0.59
YBX3-217ENST00000546164 A0A1B0GX78 115 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 EIF4E1BA6NMX2 242 aaKnown RBP11.36□□□□□ -0.59
YBX3-217ENST00000546164 C9J4A7 227 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 NRP2O60462 931 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 CD63P08962 238 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 SFTPCP11686 197 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 EZRP15311 586 aaKnown RBP11.36□□□□□ -0.59
YBX3-217ENST00000546164 CCR10P46092 362 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 DCDP81605 110 aaKnown RBP11.36□□□□□ -0.59
YBX3-217ENST00000546164 ERV3-1Q14264 604 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 ZKSCAN8Q15776 578 aaPredicted RBP11.36□□□□□ -0.59
YBX3-217ENST00000546164 UGT8Q16880 541 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 WASHC2DQ5SRD0 308 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 ATP1A1-AS1Q5TC04 95 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 GRTP1Q5TC63 336 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 PRAMEF13Q5VWM6 474 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 FRMPD2BQ6IN97 320 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 SBSNQ6UWP8 590 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 MBOAT1Q6ZNC8 495 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 CEP97Q8IW35 865 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 CEP112Q8N8E3 955 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 ENDOVQ8N8Q3 282 aaKnown RBP11.36□□□□□ -0.59
YBX3-217ENST00000546164 ATL1Q8WXF7 558 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 THAP4Q8WY91 577 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 TSPAN17Q96FV3 270 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 OR2A5Q96R48 311 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 ARHGAP9Q9BRR9 750 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 TRIM54Q9BYV2 358 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 TSPYL1Q9H0U9 437 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 ADNPQ9H2P0 1102 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 CUTCQ9NTM9 273 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 TXLNGQ9NUQ3 528 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 GEMIN8Q9NWZ8 242 aaKnown RBP11.36□□□□□ -0.59
YBX3-217ENST00000546164 ARL15Q9NXU5 204 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 DHCR7Q9UBM7 475 aaKnown RBP11.36□□□□□ -0.59
YBX3-217ENST00000546164 MTRF1LQ9UGC7 380 aaKnown RBP11.36□□□□□ -0.59
YBX3-217ENST00000546164 TUBD1Q9UJT1 453 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 TCFL5Q9UL49 500 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 POLHQ9Y253 713 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 MTO1Q9Y2Z2 717 aaKnown RBP11.36□□□□□ -0.59
YBX3-217ENST00000546164 FER1L5A0AVI2 2057 aa11.36□□□□□ -0.59
YBX3-217ENST00000546164 LOC105369274A0A096LPK9 316 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 LOC102723532A0A0G2JNH3 316 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 A0A0J9YVX5 310 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 PABPN1LA6NDY0 278 aaKnown RBP11.35□□□□□ -0.59
YBX3-217ENST00000546164 DSCR3O14972 297 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 KLF7O75840 302 aaPredicted RBP11.35□□□□□ -0.59
YBX3-217ENST00000546164 C1QL1O75973 258 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 FURINP09958 794 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 SAT1P21673 171 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 SPRP35270 261 aaPredicted RBP11.35□□□□□ -0.59
YBX3-217ENST00000546164 SLC12A2P55011 1212 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 VSX2P58304 361 aaPredicted RBP11.35□□□□□ -0.59
YBX3-217ENST00000546164 RPS18P62269 152 aaKnown RBP11.35□□□□□ -0.59
YBX3-217ENST00000546164 CDKL1Q00532 357 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 NAE1Q13564 534 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 TSTA3Q13630 321 aaPredicted RBP11.35□□□□□ -0.59
YBX3-217ENST00000546164 LY6DQ14210 128 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 ZNF460Q14592 562 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 ZXDCQ2QGD7 858 aaPredicted RBP11.35□□□□□ -0.59
YBX3-217ENST00000546164 PRTGQ2VWP7 1150 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 DEFB109BQ30KR1 87 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 FAM214AQ32MH5 1076 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 KBTBD12Q3ZCT8 623 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 NKAIN1Q4KMZ8 207 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 THEMIS2Q5TEJ8 643 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 C1orf189Q5VU69 101 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 MRPL14Q6P1L8 145 aaKnown RBP11.35□□□□□ -0.59
YBX3-217ENST00000546164 LCTLQ6UWM7 567 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 ADAMTSL2Q86TH1 951 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 CTAGE3PQ8IX95 158 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 OR4N4Q8N0Y3 316 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 TTC29Q8NA56 475 aaPredicted RBP11.35□□□□□ -0.59
YBX3-217ENST00000546164 OR56A3Q8NH54 315 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 ADAMTS17Q8TE56 1095 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 FBF1Q8TES7 1133 aa11.35□□□□□ -0.59
YBX3-217ENST00000546164 ANKRD49Q8WVL7 239 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms