RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TMCO6Q96DC7 493 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 COL21A1Q96P44 957 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 SPON2Q9BUD6 331 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 NTMT1Q9BV86 223 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 ACPTQ9BZG2 426 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 ADPRHL2Q9NX46 363 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 MARCH2Q9P0N8 246 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 TMA7Q9Y2S6 64 aaKnown RBP13.79□□□□□ -0.2
SRP54-202ENST00000546080 PCDHB1Q9Y5F3 818 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 PCDHGC4Q9Y5F7 938 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 CAPN5O15484 640 aaPredicted RBP13.79□□□□□ -0.2
SRP54-202ENST00000546080 KRT6AP02538 564 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 KRT6BP04259 564 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 STSP08842 583 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 CHRNB1P11230 501 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 PRPS2P11908 318 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 EPB42P16452 691 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 CA5AP35218 305 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 GGT2P36268 569 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 PIK3CBP42338 1070 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 RGS6P49758 472 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 NUDT6P53370 316 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 CYP4F2P78329 520 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 C10orf120Q5SQS8 335 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 MLIPQ5VWP3 458 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 NXNL2Q5VZ03 156 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 ERICH5Q6P6B1 374 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 CBLL1Q75N03 491 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 ZZZ3Q8IYH5 903 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 FAM9CQ8IZT9 166 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 BEND7Q8N7W2 519 aaPredicted RBP13.79□□□□□ -0.2
SRP54-202ENST00000546080 TPD52L3Q96J77 140 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 DMRTB1Q96MA1 342 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 SDHCQ99643 169 aaPredicted RBP13.79□□□□□ -0.2
SRP54-202ENST00000546080 EPYCQ99645 322 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 KCNS3Q9BQ31 491 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 SLC30A2Q9BRI3 323 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 TTPALQ9BTX7 342 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 FKBP14Q9NWM8 211 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 GPR83Q9NYM4 423 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 TAS2R9Q9NYW1 312 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 PPT2Q9UMR5 302 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 RAI2Q9Y5P3 530 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 SNX8Q9Y5X2 465 aa13.79□□□□□ -0.2
SRP54-202ENST00000546080 TTC3P53804 2025 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 A0A0U1RQS6 177 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 A8MV72 311 aaPredicted RBP13.78□□□□□ -0.2
SRP54-202ENST00000546080 H3BQ06 376 aaPredicted RBP13.78□□□□□ -0.2
SRP54-202ENST00000546080 CLIC1O00299 241 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 LRATO95237 230 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 PTHP01270 115 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 CTSHP09668 335 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 TACR2P21452 398 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 DDOSTP39656 456 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 GPR50Q13585 617 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 GRB14Q14449 540 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 PTPRRQ15256 657 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 PPP2R2DQ66LE6 453 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 OR4F3Q6IEY1 312 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 PDE12Q6L8Q7 609 aaKnown RBP13.78□□□□□ -0.2
SRP54-202ENST00000546080 NRARPQ7Z6K4 114 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 CYP4Z2PQ8N1L4 340 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 SIMC1Q8NDZ2 872 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 NPLOC4Q8TAT6 608 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 TESCQ96BS2 214 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 SUSD3Q96L08 255 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 B3GALT6Q96L58 329 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 TMEM246Q9BRR3 403 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 ADGRE3Q9BY15 652 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 SLC29A3Q9BZD2 475 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 CIPCQ9C0C6 399 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 RUBCNLQ9H714 662 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 TBC1D24Q9ULP9 559 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 CFL2Q9Y281 166 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 TRPV2Q9Y5S1 764 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 ANKRD66B4E2M5 251 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 F5H5T6 163 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 F8W810 466 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 H7C0S8 307 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 AP3D1O14617 1153 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 KIAA0513O60268 411 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 EPN2O95208 641 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 KCNK5O95279 499 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 PDYNP01213 254 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 ENGP17813 658 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 TIE1P35590 1138 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 BEX3Q00994 111 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 CACNG1Q06432 222 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 CPSF6Q16630 551 aaKnown RBP eCLIP13.78□□□□□ -0.2
SRP54-202ENST00000546080 NADSYN1Q6IA69 706 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 ZNF605Q86T29 641 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 KLHDC9Q8NEP7 349 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 FLCNQ8NFG4 579 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 ST13P5Q8NFI4 369 aaPredicted RBP13.78□□□□□ -0.2
SRP54-202ENST00000546080 SETD6Q8TBK2 473 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 ST6GAL2Q96JF0 529 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 CLPBQ9H078 707 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 MAGEH1Q9H213 219 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 RAD18Q9NS91 495 aa13.78□□□□□ -0.2
SRP54-202ENST00000546080 OLA1Q9NTK5 396 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms