RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 NKX3-2P78367 333 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 CREMQ03060 361 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 SRSF11Q05519 484 aaKnown RBP8.5□□□□□ -1.05
TDP1-204ENST00000545686 TWF1Q12792 350 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 GPR17Q13304 367 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 NFATC2Q13469 925 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 LAPTM4AQ15012 233 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 TOR1AIP1Q5JTV8 583 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 CLLU1OSQ5K130 101 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 FAM171A1Q5VUB5 890 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 ZCCHC8Q6NZY4 707 aaKnown RBP8.5□□□□□ -1.05
TDP1-204ENST00000545686 SLC46A3Q7Z3Q1 461 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 POC5Q8NA72 575 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 SELENOMQ8WWX9 145 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 MYO19Q96H55 970 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 HSH2DQ96JZ2 352 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 RAD9AQ99638 391 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 HOXD1Q9GZZ0 328 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 ZBTB20Q9HC78 741 aaPredicted RBP8.5□□□□□ -1.05
TDP1-204ENST00000545686 FAM120CQ9NX05 1096 aaKnown RBP8.5□□□□□ -1.05
TDP1-204ENST00000545686 RAPGEFL1Q9UHV5 662 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 SLCO3A1Q9UIG8 710 aa8.5□□□□□ -1.05
TDP1-204ENST00000545686 PNMA8CA0A1B0GUJ8 204 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 hCG_2039718K7EN88 272 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 M0R082 166 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 CLIC1O00299 241 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 RGS13O14921 159 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 HAT1O14929 419 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 CD160O95971 181 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 RPLP0P05388 317 aaKnown RBP8.49□□□□□ -1.05
TDP1-204ENST00000545686 ZNF24P17028 368 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 PTX3P26022 381 aaPredicted RBP8.49□□□□□ -1.05
TDP1-204ENST00000545686 OLR1P78380 273 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 ZNF33BQ06732 778 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 SLC13A2Q13183 592 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 SLC14A1Q13336 389 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 TIGD6Q17RP2 521 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 LRIT3Q3SXY7 679 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 GPR33Q49SQ1 333 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 COLEC12Q5KU26 742 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 TPRG1LQ5T0D9 272 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 CXorf57Q6NSI4 855 aaKnown RBP8.49□□□□□ -1.05
TDP1-204ENST00000545686 FAM151BQ6UXP7 276 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 PRR23CQ6ZRP0 262 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 ANKRD46Q86W74 232 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 PTOV1Q86YD1 416 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 OR10Q1Q8NGQ4 319 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 OVCA2Q8WZ82 227 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 DNASE1L2Q92874 299 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 EID2BQ96D98 161 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 TSSK3Q96PN8 268 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 SEPT5Q99719 369 aaPredicted RBP8.49□□□□□ -1.05
TDP1-204ENST00000545686 YIPF2Q9BWQ6 316 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 BOCQ9BWV1 1114 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 ELOVL6Q9H5J4 265 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 ASB8Q9H765 288 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 KCTD5Q9NXV2 234 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 GPRC5BQ9NZH0 403 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 NPAP1Q9NZP6 1156 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 AASSQ9UDR5 926 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 CORO2BQ9UQ03 480 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 PCDHB9Q9Y5E1 797 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 PCDHGA6Q9Y5G7 932 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 PEX16Q9Y5Y5 336 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 SLC38A8A6NNN8 435 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 FAM47E-STBD1D6RA91 191 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 FPGTO14772 594 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 TBX1O43435 398 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 KCNK2O95069 426 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 PGLSO95336 258 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 MED26O95402 600 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 DLGAP3O95886 979 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 CDK1P06493 297 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 ITGB6P18564 788 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 EPORP19235 508 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 EPHA2P29317 976 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 GGT2P36268 569 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 DEFA1P59665 94 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 DEFA3P59666 94 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 CPSF6Q16630 551 aaKnown RBP eCLIP8.49□□□□□ -1.05
TDP1-204ENST00000545686 ARMC12Q5T9G4 340 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 RNF219Q5W0B1 726 aaPredicted RBP8.49□□□□□ -1.05
TDP1-204ENST00000545686 ZSWIM9Q86XI8 627 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 DNAJC22Q8N4W6 341 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 L3MBTL4Q8NA19 623 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 CHTF18Q8WVB6 975 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 HTRA1Q92743 480 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 CCDC97Q96F63 343 aaPredicted RBP8.49□□□□□ -1.05
TDP1-204ENST00000545686 RASSF1Q9NS23 344 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 MKLN1Q9UL63 735 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 PNMA8BQ9ULN7 279 aaPredicted RBP8.49□□□□□ -1.05
TDP1-204ENST00000545686 PADI2Q9Y2J8 665 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 PRG3Q9Y2Y8 225 aaPredicted RBP8.49□□□□□ -1.05
TDP1-204ENST00000545686 PCDHGB3Q9Y5G1 929 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 PRSS21Q9Y6M0 314 aa8.49□□□□□ -1.05
TDP1-204ENST00000545686 CLCA1A8K7I4 914 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 A8MVJ9 347 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 MAGEB17A8MXT2 336 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 PLK4O00444 970 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 VNN2O95498 520 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms