RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 CDH6P55285 790 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 TPI1P60174 286 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 TUBB2AQ13885 445 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 IL11RAQ14626 422 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 CHRFAM7AQ494W8 412 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 MIDNQ504T8 468 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 TFDP3Q5H9I0 405 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 MANEALQ5VSG8 457 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 WDR74Q6RFH5 385 aaPredicted RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 PRSS57Q6UWY2 283 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 RFX8Q6ZV50 586 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 ERN2Q76MJ5 926 aaKnown RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 SETD3Q86TU7 594 aaPredicted RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 RASGRP3Q8IV61 690 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 GALNT16Q8N428 558 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 SH2D3CQ8N5H7 860 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 CPSF7Q8N684 471 aaKnown RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 CCDC185Q8N715 623 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 GLB1L3Q8NCI6 653 aaPredicted RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 OR52K2Q8NGK3 314 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 HSPH1Q92598 858 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 SDCCAG3Q96C92 435 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 FAF2Q96CS3 445 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 PBKQ96KB5 322 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 CCDC114Q96M63 670 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 CCDC138Q96M89 665 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 FAM210AQ96ND0 272 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 NAPGQ99747 312 aaPredicted RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 PAIP2Q9BPZ3 127 aaKnown RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 ADI1Q9BV57 179 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 TUBB2BQ9BVA1 445 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 BTBD2Q9BX70 525 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 MAK16Q9BXY0 300 aaKnown RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 FRMD8P1Q9BZ68 369 aaPredicted RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 SIK2Q9H0K1 926 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 OR10A5Q9H207 317 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 PCDH18Q9HCL0 1135 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 DYRK4Q9NR20 520 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 MBNL3Q9NUK0 354 aaKnown RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 KCMF1Q9P0J7 381 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 RNF14Q9UBS8 474 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 LNPEPQ9UIQ6 1025 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 CDC42EP3Q9UKI2 254 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 OR51B4Q9Y5P0 310 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 SLC30A1Q9Y6M5 507 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 ILVBLA1L0T0 632 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 USP27XA6NNY8 438 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 RASA4BC9J798 803 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 PPM1DO15297 605 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 RASA4O43374 803 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 SNAP91O60641 907 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 SPAG6O75602 509 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 TJP3O95049 919 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 FTCDO95954 541 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 TNFP01375 233 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 CTSLP07711 333 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 RHOCP08134 193 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 SRCP12931 536 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 UGT1A4P22310 534 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 CHRNA3P32297 505 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 NR2C2P49116 596 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 ARSEP51690 589 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 MAP2K6P52564 334 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 SOX8P57073 446 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 GEMIN4P57678 1058 aaKnown RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 YBEYP58557 167 aaPredicted RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 TAS2R40P59535 323 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 DCAF7P61962 342 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 MGAT2Q10469 447 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 DPYSQ14117 519 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 TAZQ16635 292 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 PARP15Q460N3 678 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 PPP6R3Q5H9R7 873 aaPredicted RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 SEL1L2Q5TEA6 688 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 KANK2Q63ZY3 851 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 RWDD4Q6NW29 188 aaKnown RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 TMCO3Q6UWJ1 677 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 IGFL2Q6UWQ7 119 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 ETV3LQ6ZN32 361 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 CYP4V2Q6ZWL3 525 aaPredicted RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 TFAP2DQ7Z6R9 452 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 ZNF683Q8IZ20 524 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 UMODL1-AS1Q8N2C9 162 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 SLC35F6Q8N357 371 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 ZBTB2Q8N680 514 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 RTL3Q8N8U3 475 aaKnown RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 DCAF4L2Q8NA75 395 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 TMIEQ8NEW7 156 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 PHF10Q8WUB8 498 aaKnown RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 LRTOMTQ8WZ04 291 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 ALG14Q96F25 216 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 FCRL4Q96PJ5 515 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 CSPG4P5Q96PW8 444 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 TAAR6Q96RI8 345 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 PEBP4Q96S96 227 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 FERMT1Q9BQL6 677 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 TLR10Q9BXR5 811 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 HOMER3Q9NSC5 361 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 HAUS2Q9NVX0 235 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms