RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 PYROXD1Q8WU10 500 aa22.26■■□□□ 1.15
CHFR-222ENST00000544093 LINGO1Q96FE5 620 aa22.26■■□□□ 1.15
CHFR-222ENST00000544093 ING2Q9H160 280 aa22.26■■□□□ 1.15
CHFR-222ENST00000544093 WDR54Q9H977 334 aa22.26■■□□□ 1.15
CHFR-222ENST00000544093 SLC6A20Q9NP91 592 aa22.26■■□□□ 1.15
CHFR-222ENST00000544093 CCDC177Q9NQR7 707 aaPredicted RBP22.26■■□□□ 1.15
CHFR-222ENST00000544093 G3BP2Q9UN86 482 aaKnown RBP22.26■■□□□ 1.15
CHFR-222ENST00000544093 ANKRD12Q6UB98 2062 aa22.26■■□□□ 1.15
CHFR-222ENST00000544093 HYKKA2RU49 373 aa22.25■■□□□ 1.15
CHFR-222ENST00000544093 J3QKU1 62 aa22.25■■□□□ 1.15
CHFR-222ENST00000544093 TXNDC9O14530 226 aa22.25■■□□□ 1.15
CHFR-222ENST00000544093 SUV39H1O43463 412 aa22.25■■□□□ 1.15
CHFR-222ENST00000544093 AP1S2P56377 157 aa22.25■■□□□ 1.15
CHFR-222ENST00000544093 NFKB2Q00653 900 aa22.25■■□□□ 1.15
CHFR-222ENST00000544093 C2orf54Q08AI8 447 aa22.25■■□□□ 1.15
CHFR-222ENST00000544093 DUPD1Q68J44 220 aa22.25■■□□□ 1.15
CHFR-222ENST00000544093 ZNF425Q6IV72 752 aa22.25■■□□□ 1.15
CHFR-222ENST00000544093 PRMT9Q6P2P2 845 aa22.25■■□□□ 1.15
CHFR-222ENST00000544093 PAQR7Q86WK9 346 aa22.25■■□□□ 1.15
CHFR-222ENST00000544093 LRRC56Q8IYG6 542 aaPredicted RBP22.25■■□□□ 1.15
CHFR-222ENST00000544093 CDKL2Q92772 493 aa22.25■■□□□ 1.15
CHFR-222ENST00000544093 RERGQ96A58 199 aaPredicted RBP22.25■■□□□ 1.15
CHFR-222ENST00000544093 PTERQ96BW5 349 aa22.25■■□□□ 1.15
CHFR-222ENST00000544093 TRIM54Q9BYV2 358 aa22.25■■□□□ 1.15
CHFR-222ENST00000544093 DPH5Q9H2P9 285 aa22.25■■□□□ 1.15
CHFR-222ENST00000544093 STOX2Q9P2F5 926 aaPredicted RBP22.25■■□□□ 1.15
CHFR-222ENST00000544093 ANAPC2Q9UJX6 822 aa22.25■■□□□ 1.15
CHFR-222ENST00000544093 TLK1Q9UKI8 766 aa22.25■■□□□ 1.15
CHFR-222ENST00000544093 NXT1Q9UKK6 140 aaKnown RBP22.25■■□□□ 1.15
CHFR-222ENST00000544093 PDE10AQ9Y233 779 aa22.25■■□□□ 1.15
CHFR-222ENST00000544093 PTRH2Q9Y3E5 179 aaKnown RBP22.25■■□□□ 1.15
CHFR-222ENST00000544093 FASTKD3Q14CZ7 662 aaKnown RBP22.24■■□□□ 1.15
CHFR-222ENST00000544093 MUM1Q2TAK8 710 aa22.24■■□□□ 1.15
CHFR-222ENST00000544093 FRMPD2BQ6IN97 320 aa22.24■■□□□ 1.15
CHFR-222ENST00000544093 FBXO42Q6P3S6 717 aa22.24■■□□□ 1.15
CHFR-222ENST00000544093 OVCH1Q7RTY7 1134 aa22.24■■□□□ 1.15
CHFR-222ENST00000544093 STRA8Q7Z7C7 330 aa22.24■■□□□ 1.15
CHFR-222ENST00000544093 PPFIBP2Q8ND30 876 aa22.24■■□□□ 1.15
CHFR-222ENST00000544093 PDLIM5Q96HC4 596 aaKnown RBP22.24■■□□□ 1.15
CHFR-222ENST00000544093 SLC26A1Q9H2B4 701 aa22.24■■□□□ 1.15
CHFR-222ENST00000544093 ZNF71Q9NQZ8 489 aaPredicted RBP22.24■■□□□ 1.15
CHFR-222ENST00000544093 SLC17A6Q9P2U8 582 aa22.24■■□□□ 1.15
CHFR-222ENST00000544093 PCDHGA9Q9Y5G4 932 aaKnown RBP22.24■■□□□ 1.15
CHFR-222ENST00000544093 BSNQ9UPA5 3926 aa22.24■■□□□ 1.15
CHFR-222ENST00000544093 MDC1Q14676 2089 aaKnown RBP22.23■■□□□ 1.15
CHFR-222ENST00000544093 IGKV1-8A0A0C4DH67 115 aa22.23■■□□□ 1.15
CHFR-222ENST00000544093 ARGFXA6NJG6 315 aa22.23■■□□□ 1.15
CHFR-222ENST00000544093 ENO2P09104 434 aaPredicted RBP22.23■■□□□ 1.15
CHFR-222ENST00000544093 GSTA2P09210 222 aa22.23■■□□□ 1.15
CHFR-222ENST00000544093 TBPL1P62380 186 aa22.23■■□□□ 1.15
CHFR-222ENST00000544093 CYS1Q717R9 158 aa22.23■■□□□ 1.15
CHFR-222ENST00000544093 ZC3HC1Q86WB0 502 aaKnown RBP22.23■■□□□ 1.15
CHFR-222ENST00000544093 ANKRD7Q92527 254 aa22.23■■□□□ 1.15
CHFR-222ENST00000544093 MVB12AQ96EY5 273 aa22.23■■□□□ 1.15
CHFR-222ENST00000544093 VPS39Q96JC1 886 aa22.23■■□□□ 1.15
CHFR-222ENST00000544093 FER1L6-AS2Q96M78 137 aa22.23■■□□□ 1.15
CHFR-222ENST00000544093 ADAMTS6Q9UKP5 1117 aa22.23■■□□□ 1.15
CHFR-222ENST00000544093 CCDC88CQ9P219 2028 aa22.23■■□□□ 1.15
CHFR-222ENST00000544093 H0YGG7 62 aa22.22■■□□□ 1.15
CHFR-222ENST00000544093 PEX12O00623 359 aa22.22■■□□□ 1.15
CHFR-222ENST00000544093 TSPAN12O95859 305 aa22.22■■□□□ 1.15
CHFR-222ENST00000544093 EIF2S1P05198 315 aaKnown RBP22.22■■□□□ 1.15
CHFR-222ENST00000544093 OTX2P32243 289 aa22.22■■□□□ 1.15
CHFR-222ENST00000544093 ARF3P61204 181 aaPredicted RBP22.22■■□□□ 1.15
CHFR-222ENST00000544093 YBX1P67809 324 aaKnown RBP22.22■■□□□ 1.15
CHFR-222ENST00000544093 MRPS25P82663 173 aaKnown RBP22.22■■□□□ 1.15
CHFR-222ENST00000544093 GARNL3Q5VVW2 1013 aa22.22■■□□□ 1.15
CHFR-222ENST00000544093 PRAMEF13Q5VWM6 474 aa22.22■■□□□ 1.15
CHFR-222ENST00000544093 AGTRAPQ6RW13 159 aa22.22■■□□□ 1.15
CHFR-222ENST00000544093 ADCK2Q7Z695 626 aa22.22■■□□□ 1.15
CHFR-222ENST00000544093 ATL1Q8WXF7 558 aa22.22■■□□□ 1.15
CHFR-222ENST00000544093 TRIM55Q9BYV6 548 aa22.22■■□□□ 1.15
CHFR-222ENST00000544093 RHOJQ9H4E5 214 aa22.22■■□□□ 1.15
CHFR-222ENST00000544093 SAYSD1Q9NPB0 183 aa22.22■■□□□ 1.15
CHFR-222ENST00000544093 TMEM184CQ9NVA4 438 aa22.22■■□□□ 1.15
CHFR-222ENST00000544093 GRHL1Q9NZI5 618 aa22.22■■□□□ 1.15
CHFR-222ENST00000544093 TXNDC16Q9P2K2 825 aa22.22■■□□□ 1.15
CHFR-222ENST00000544093 CDC23Q9UJX2 597 aa22.22■■□□□ 1.15
CHFR-222ENST00000544093 CDC14AQ9UNH5 594 aa22.22■■□□□ 1.15
CHFR-222ENST00000544093 TP53TG5Q9Y2B4 290 aa22.22■■□□□ 1.15
CHFR-222ENST00000544093 PCDHGB7Q9Y5F8 929 aa22.22■■□□□ 1.15
CHFR-222ENST00000544093 LOC105369274A0A096LPK9 316 aa22.21■■□□□ 1.15
CHFR-222ENST00000544093 LOC102723532A0A0G2JNH3 316 aa22.21■■□□□ 1.15
CHFR-222ENST00000544093 PRPF4O43172 522 aaKnown RBP eCLIP22.21■■□□□ 1.15
CHFR-222ENST00000544093 KLHL41O60662 606 aa22.21■■□□□ 1.15
CHFR-222ENST00000544093 ZNF37AP17032 561 aaPredicted RBP22.21■■□□□ 1.15
CHFR-222ENST00000544093 ITGAXP20702 1163 aa22.21■■□□□ 1.15
CHFR-222ENST00000544093 KLRB1Q12918 225 aa22.21■■□□□ 1.15
CHFR-222ENST00000544093 SLC9A5Q14940 896 aa22.21■■□□□ 1.15
CHFR-222ENST00000544093 PRTGQ2VWP7 1150 aa22.21■■□□□ 1.15
CHFR-222ENST00000544093 FAM69BQ5VUD6 431 aa22.21■■□□□ 1.15
CHFR-222ENST00000544093 CPZQ66K79 652 aa22.21■■□□□ 1.15
CHFR-222ENST00000544093 ASB18Q6ZVZ8 466 aa22.21■■□□□ 1.15
CHFR-222ENST00000544093 MRGPREQ86SM8 312 aa22.21■■□□□ 1.15
CHFR-222ENST00000544093 OR4N4Q8N0Y3 316 aa22.21■■□□□ 1.15
CHFR-222ENST00000544093 NKAPQ8N5F7 415 aaKnown RBP22.21■■□□□ 1.15
CHFR-222ENST00000544093 CSNK1A1LQ8N752 337 aa22.21■■□□□ 1.15
CHFR-222ENST00000544093 VPS50Q96JG6 964 aa22.21■■□□□ 1.15
CHFR-222ENST00000544093 CABS1Q96KC9 395 aa22.21■■□□□ 1.15
CHFR-222ENST00000544093 OR2A5Q96R48 311 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms