RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 YBX1P67809 324 aaKnown RBP21.52■■□□□ 1.04
CDKN3-207ENST00000543789 KIF5AQ12840 1032 aa21.52■■□□□ 1.04
CDKN3-207ENST00000543789 DSG2Q14126 1118 aa21.52■■□□□ 1.04
CDKN3-207ENST00000543789 GFRALQ6UXV0 394 aa21.52■■□□□ 1.04
CDKN3-207ENST00000543789 PRUNE1Q86TP1 453 aa21.52■■□□□ 1.04
CDKN3-207ENST00000543789 MVB12AQ96EY5 273 aa21.52■■□□□ 1.04
CDKN3-207ENST00000543789 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.52■■□□□ 1.04
CDKN3-207ENST00000543789 IGHV1-45A0A0A0MS14 117 aa21.51■■□□□ 1.03
CDKN3-207ENST00000543789 VPS26AO75436 327 aa21.51■■□□□ 1.03
CDKN3-207ENST00000543789 SNRNP200O75643 2136 aaKnown RBP21.51■■□□□ 1.03
CDKN3-207ENST00000543789 HEXBP07686 556 aa21.51■■□□□ 1.03
CDKN3-207ENST00000543789 UQCRHP07919 91 aa21.51■■□□□ 1.03
CDKN3-207ENST00000543789 EIF3BP55884 814 aaKnown RBP21.51■■□□□ 1.03
CDKN3-207ENST00000543789 SESN2P58004 480 aaPredicted RBP21.51■■□□□ 1.03
CDKN3-207ENST00000543789 EEF1A2Q05639 463 aaKnown RBP21.51■■□□□ 1.03
CDKN3-207ENST00000543789 RIPOR1Q6ZS17 1223 aa21.51■■□□□ 1.03
CDKN3-207ENST00000543789 CCDC89Q8N998 374 aa21.51■■□□□ 1.03
CDKN3-207ENST00000543789 C1orf54Q8WWF1 131 aa21.51■■□□□ 1.03
CDKN3-207ENST00000543789 PLCD4Q9BRC7 762 aa21.51■■□□□ 1.03
CDKN3-207ENST00000543789 MRPS30Q9NP92 439 aaKnown RBP21.51■■□□□ 1.03
CDKN3-207ENST00000543789 TREX1Q9NSU2 369 aa21.51■■□□□ 1.03
CDKN3-207ENST00000543789 C14orf105Q9NVL8 296 aa21.51■■□□□ 1.03
CDKN3-207ENST00000543789 RIC8BQ9NVN3 520 aa21.51■■□□□ 1.03
CDKN3-207ENST00000543789 PAK5Q9P286 719 aa21.51■■□□□ 1.03
CDKN3-207ENST00000543789 KLF2Q9Y5W3 355 aaPredicted RBP21.51■■□□□ 1.03
CDKN3-207ENST00000543789 DOCK10Q96BY6 2186 aa21.51■■□□□ 1.03
CDKN3-207ENST00000543789 PHF2O75151 1096 aa21.5■■□□□ 1.03
CDKN3-207ENST00000543789 MATN4O95460 622 aa21.5■■□□□ 1.03
CDKN3-207ENST00000543789 F10P00742 488 aa21.5■■□□□ 1.03
CDKN3-207ENST00000543789 SLC26A3P40879 764 aa21.5■■□□□ 1.03
CDKN3-207ENST00000543789 CRADDP78560 199 aa21.5■■□□□ 1.03
CDKN3-207ENST00000543789 FAAH2Q6GMR7 532 aa21.5■■□□□ 1.03
CDKN3-207ENST00000543789 TMEM207Q6UWW9 146 aa21.5■■□□□ 1.03
CDKN3-207ENST00000543789 CSNK1A1LQ8N752 337 aa21.5■■□□□ 1.03
CDKN3-207ENST00000543789 OR9A1PQ8NGU1 263 aa21.5■■□□□ 1.03
CDKN3-207ENST00000543789 ITLN2Q8WWU7 325 aaPredicted RBP21.5■■□□□ 1.03
CDKN3-207ENST00000543789 TGIF2Q9GZN2 237 aa21.5■■□□□ 1.03
CDKN3-207ENST00000543789 MKKSQ9NPJ1 570 aaPredicted RBP21.5■■□□□ 1.03
CDKN3-207ENST00000543789 SUCOQ9UBS9 1254 aaKnown RBP21.5■■□□□ 1.03
CDKN3-207ENST00000543789 RUVBL1Q9Y265 456 aaKnown RBP21.5■■□□□ 1.03
CDKN3-207ENST00000543789 TRGV8A0A0C4DH27 118 aa21.49■■□□□ 1.03
CDKN3-207ENST00000543789 FFAR3O14843 346 aa21.49■■□□□ 1.03
CDKN3-207ENST00000543789 GPR42O15529 346 aa21.49■■□□□ 1.03
CDKN3-207ENST00000543789 WDPCPO95876 746 aa21.49■■□□□ 1.03
CDKN3-207ENST00000543789 ANXA5P08758 320 aa21.49■■□□□ 1.03
CDKN3-207ENST00000543789 MYBL2P10244 700 aa21.49■■□□□ 1.03
CDKN3-207ENST00000543789 ICAM2P13598 275 aa21.49■■□□□ 1.03
CDKN3-207ENST00000543789 FMO4P31512 558 aa21.49■■□□□ 1.03
CDKN3-207ENST00000543789 SNX1Q13596 522 aa21.49■■□□□ 1.03
CDKN3-207ENST00000543789 ANKRD20A4Q4UJ75 823 aa21.49■■□□□ 1.03
CDKN3-207ENST00000543789 CTSL3PQ5NE16 218 aa21.49■■□□□ 1.03
CDKN3-207ENST00000543789 GARNL3Q5VVW2 1013 aa21.49■■□□□ 1.03
CDKN3-207ENST00000543789 LRRC8BQ6P9F7 803 aa21.49■■□□□ 1.03
CDKN3-207ENST00000543789 SDCCAG8Q86SQ7 713 aaPredicted RBP21.49■■□□□ 1.03
CDKN3-207ENST00000543789 TXLNBQ8N3L3 684 aa21.49■■□□□ 1.03
CDKN3-207ENST00000543789 OTUD6BQ8N6M0 293 aa21.49■■□□□ 1.03
CDKN3-207ENST00000543789 DNAJB8Q8NHS0 232 aa21.49■■□□□ 1.03
CDKN3-207ENST00000543789 SMPDL3AQ92484 453 aa21.49■■□□□ 1.03
CDKN3-207ENST00000543789 MMABQ96EY8 250 aaPredicted RBP21.49■■□□□ 1.03
CDKN3-207ENST00000543789 BIRC8Q96P09 236 aa21.49■■□□□ 1.03
CDKN3-207ENST00000543789 IL22Q9GZX6 179 aa21.49■■□□□ 1.03
CDKN3-207ENST00000543789 ABI3Q9P2A4 366 aa21.49■■□□□ 1.03
CDKN3-207ENST00000543789 TSR3Q9UJK0 312 aaKnown RBP21.49■■□□□ 1.03
CDKN3-207ENST00000543789 LOC102723996A0A087X1L8 192 aa21.48■■□□□ 1.03
CDKN3-207ENST00000543789 UNC5CO95185 931 aa21.48■■□□□ 1.03
CDKN3-207ENST00000543789 RASAL1O95294 804 aa21.48■■□□□ 1.03
CDKN3-207ENST00000543789 CRYABP02511 175 aaKnown RBP21.48■■□□□ 1.03
CDKN3-207ENST00000543789 CELA2AP08217 269 aa21.48■■□□□ 1.03
CDKN3-207ENST00000543789 POU3F2P20265 443 aaPredicted RBP21.48■■□□□ 1.03
CDKN3-207ENST00000543789 NMBRP28336 390 aa21.48■■□□□ 1.03
CDKN3-207ENST00000543789 GRNP28799 593 aaKnown RBP21.48■■□□□ 1.03
CDKN3-207ENST00000543789 RPA3P35244 121 aaPredicted RBP21.48■■□□□ 1.03
CDKN3-207ENST00000543789 NPY2RP49146 381 aa21.48■■□□□ 1.03
CDKN3-207ENST00000543789 ZNF75DP51815 510 aa21.48■■□□□ 1.03
CDKN3-207ENST00000543789 AP2B1P63010 937 aa21.48■■□□□ 1.03
CDKN3-207ENST00000543789 HKDC1Q2TB90 917 aa21.48■■□□□ 1.03
CDKN3-207ENST00000543789 SEL1L2Q5TEA6 688 aa21.48■■□□□ 1.03
CDKN3-207ENST00000543789 SUSD1Q6UWL2 747 aa21.48■■□□□ 1.03
CDKN3-207ENST00000543789 SLC13A5Q86YT5 568 aaPredicted RBP21.48■■□□□ 1.03
CDKN3-207ENST00000543789 AMER3Q8N944 861 aa21.48■■□□□ 1.03
CDKN3-207ENST00000543789 SUN3Q8TAQ9 357 aa21.48■■□□□ 1.03
CDKN3-207ENST00000543789 BAG1Q99933 345 aaPredicted RBP21.48■■□□□ 1.03
CDKN3-207ENST00000543789 RNF32Q9H0A6 362 aa21.48■■□□□ 1.03
CDKN3-207ENST00000543789 ZNF700Q9H0M5 742 aa21.48■■□□□ 1.03
CDKN3-207ENST00000543789 UTP6Q9NYH9 597 aaKnown RBP21.48■■□□□ 1.03
CDKN3-207ENST00000543789 BFARQ9NZS9 450 aa21.48■■□□□ 1.03
CDKN3-207ENST00000543789 SEC14L3Q9UDX4 400 aa21.48■■□□□ 1.03
CDKN3-207ENST00000543789 NUP210LQ5VU65 1888 aa21.47■■□□□ 1.03
CDKN3-207ENST00000543789 A0A0U1RQJ8 604 aa21.47■■□□□ 1.03
CDKN3-207ENST00000543789 H3BMM5 538 aa21.47■■□□□ 1.03
CDKN3-207ENST00000543789 AP3B1O00203 1094 aa21.47■■□□□ 1.03
CDKN3-207ENST00000543789 ZSCAN5DPP0CG00 497 aa21.47■■□□□ 1.03
CDKN3-207ENST00000543789 ITGAMP11215 1152 aa21.47■■□□□ 1.03
CDKN3-207ENST00000543789 ERGP11308 486 aa21.47■■□□□ 1.03
CDKN3-207ENST00000543789 PKMP14618 531 aaKnown RBP21.47■■□□□ 1.03
CDKN3-207ENST00000543789 MST1P26927 711 aa21.47■■□□□ 1.03
CDKN3-207ENST00000543789 ATP5DP30049 168 aa21.47■■□□□ 1.03
CDKN3-207ENST00000543789 RPL22P35268 128 aaKnown RBP21.47■■□□□ 1.03
CDKN3-207ENST00000543789 GBX1Q14549 363 aa21.47■■□□□ 1.03
CDKN3-207ENST00000543789 ARHGAP19Q14CB8 494 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms