RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 A0A1W2PRB8 838 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 B4GALT2O60909 372 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 EFNA1P20827 205 aaPredicted RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 PTX3P26022 381 aaPredicted RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 ARCN1P48444 511 aaKnown RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 TMED10P49755 219 aaKnown RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 KRR1Q13601 381 aaKnown RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 LPAL2Q16609 132 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 HKDC1Q2TB90 917 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 FAM174BQ3ZCQ3 159 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 GLYATQ6IB77 296 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 RALGPS2Q86X27 583 aaPredicted RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 BPIFB6Q8NFQ5 453 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 NEK7Q8TDX7 302 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 CCDC74AQ96AQ1 378 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 SHISA4Q96DD7 197 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 CRELD1Q96HD1 420 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 TSGA13Q96PP4 275 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 GAL3ST1Q99999 423 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 ZNF576Q9H609 170 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 RC3H2Q9HBD1 1191 aaKnown RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 SERINC1Q9NRX5 453 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 STMN3Q9NZ72 180 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 PTGFRNQ9P2B2 879 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 ZNF282Q9UDV7 671 aaPredicted RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 IKZF2Q9UKS7 526 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 PPM1HQ9ULR3 514 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 MED16Q9Y2X0 877 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 PCDHGB2Q9Y5G2 931 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 SRRM3A6NNA2 597 aaPredicted RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 C2orf74A8MZ97 194 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 AHCYL1O43865 530 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 ECI2O75521 394 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 NR2F6P10588 404 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 HNRNPH1P31943 449 aaKnown RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 ATP12AP54707 1039 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 HERVK_113P63132 956 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 PTGES3Q15185 160 aaKnown RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 NET1Q7Z628 596 aaPredicted RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 THOC6Q86W42 341 aaKnown RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 TDRPQ86YL5 185 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 IZUMO1Q8IYV9 350 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 FAM26EQ8N5C1 309 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 OR9A1PQ8NGU1 263 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 RTKNQ9BST9 563 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 ERVK-6Q9BXR3 956 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 MAGEE1Q9HCI5 957 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC2A6Q9UGQ3 507 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 KCTD3Q9Y597 815 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 U3KQV3 271 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 GRXCR1A8MXD5 290 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 LILRB3O75022 631 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 PSMG1O95456 288 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 ALOX5P09917 674 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 RBMS1P29558 406 aaKnown RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 GRK6P43250 576 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 CXCL12P48061 93 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 CRISP3P54108 245 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 RAB8AP61006 207 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 HYAL2Q12891 473 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 TOP3AQ13472 1001 aaPredicted RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 RAPSNQ13702 412 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 EIPR1Q53HC9 387 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 TRIQKQ629K1 86 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 P4HA3Q7Z4N8 544 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 RABEPKQ7Z6M1 372 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 OAFQ86UD1 273 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 NATD1Q8N6N6 113 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 OR2T3Q8NH03 318 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 FGF13Q92913 245 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 PIWIL1Q96J94 861 aaKnown RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 TBC1D10AQ9BXI6 508 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 C12orf65Q9H3J6 166 aaKnown RBP6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 SCML1Q9UN30 329 aa6.72□□□□□ -1.33
SRGAP1-206ENST00000543397 A0A0B4J203 849 aa6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 C9JVG2 144 aa6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 MAGEB3O15480 346 aa6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 ATP6V1G2O95670 118 aa6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 DLGAP3O95886 979 aa6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 PRPS1L1P21108 318 aa6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 PROZP22891 400 aa6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 VBP1P61758 197 aa6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 PITX1P78337 314 aaPredicted RBP6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 PTCHD3Q3KNS1 767 aa6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 SPIN4Q56A73 249 aa6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 COLEC12Q5KU26 742 aa6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 FIP1L1Q6UN15 594 aaKnown RBP6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC36A4Q6YBV0 504 aa6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 ADGRG6Q86SQ4 1221 aa6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 CCDC103Q8IW40 242 aa6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 KBTBD7Q8WVZ9 684 aa6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 MYDGFQ969H8 173 aa6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 PEBP4Q96S96 227 aa6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 PDE7BQ9NP56 450 aa6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 SSU72Q9NP77 194 aaKnown RBP6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 POLE3Q9NRF9 147 aa6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 TOR4AQ9NXH8 423 aa6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 TMEM59LQ9UK28 342 aa6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 RBM7Q9Y580 266 aaKnown RBP6.71□□□□□ -1.33
SRGAP1-206ENST00000543397 KDM3BQ7LBC6 1761 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms