RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 DOCK4Q8N1I0 1966 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 SETD9Q8NE22 299 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 UTP15Q8TED0 518 aaKnown RBP14.89□□□□□ -0.03
CNOT9-208ENST00000542068 RDH12Q96NR8 316 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 APOL4Q9BPW4 351 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 CHCHD6Q9BRQ6 235 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 ZDHHC6Q9H6R6 413 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 RMI1Q9H9A7 625 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 SIRT5Q9NXA8 310 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 CYP7B1O75881 506 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 NUDT7P0C024 238 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 GADD45AP24522 165 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 RPP38P78345 283 aaKnown RBP14.89□□□□□ -0.03
CNOT9-208ENST00000542068 SLC35A2P78381 396 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 ARMC8Q8IUR7 673 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 CLECL1Q8IZS7 167 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 CCDC115Q96NT0 180 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 TAS2R16Q9NYV7 291 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 IL37Q9NZH6 218 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 TESMINQ9Y4I5 508 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 CCL27Q9Y4X3 112 aa14.89□□□□□ -0.03
CNOT9-208ENST00000542068 TTC36A6NLP5 189 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 EVPLLA8MZ36 301 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 DMPKQ09013 629 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 PCBP2Q15366 365 aaKnown RBP eCLIP14.88□□□□□ -0.032e-6■□□□□ 8.5
CNOT9-208ENST00000542068 ATAD3BQ5T9A4 648 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 DNASE1L2Q92874 299 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 PEX13Q92968 403 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 APIPQ96GX9 242 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 CFAP97Q9P2B7 532 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 PPT2Q9UMR5 302 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 RANBP2P49792 3224 aaKnown RBP14.88□□□□□ -0.03
CNOT9-208ENST00000542068 IGLV3-27P01718 113 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 ENGP17813 658 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 HTRA3P83110 453 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 CXorf57Q6NSI4 855 aaKnown RBP14.88□□□□□ -0.03
CNOT9-208ENST00000542068 CMTM8Q8IZV2 173 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 ZNF366Q8N895 744 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 SCAIQ8N9R8 606 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 SPPL2AQ8TCT8 520 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 STARD8Q92502 1023 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 HSH2DQ96JZ2 352 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 Q96MT0 163 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 ZNF300Q96RE9 604 aaPredicted RBP14.88□□□□□ -0.03
CNOT9-208ENST00000542068 CLSTN3Q9BQT9 956 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 CD244Q9BZW8 370 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 CLMPQ9H6B4 373 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 GREB1Q4ZG55 1949 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 TMEM189-UBE2V1I3L0A0 370 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 SLC28A1O00337 649 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 PCDHGA12O60330 932 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 PAX3P23760 479 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 USP39Q53GS9 565 aaKnown RBP14.88□□□□□ -0.03
CNOT9-208ENST00000542068 STEAP3Q658P3 488 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 RETSATQ6NUM9 610 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 CCDC71Q8IV32 467 aaPredicted RBP14.88□□□□□ -0.03
CNOT9-208ENST00000542068 YIPF6Q96EC8 236 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 CPPED1Q9BRF8 314 aaPredicted RBP14.88□□□□□ -0.03
CNOT9-208ENST00000542068 COPS4Q9BT78 406 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 RERGLQ9H628 205 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 C14orf119Q9NWQ9 140 aa14.88□□□□□ -0.03
CNOT9-208ENST00000542068 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.87□□□□□ -0.03
CNOT9-208ENST00000542068 STK16O75716 305 aa14.87□□□□□ -0.03
CNOT9-208ENST00000542068 CRISP3P54108 245 aa14.87□□□□□ -0.03
CNOT9-208ENST00000542068 MRPL58Q14197 206 aaKnown RBP14.87□□□□□ -0.03
CNOT9-208ENST00000542068 AGAP7PQ5VUJ5 663 aa14.87□□□□□ -0.03
CNOT9-208ENST00000542068 TRAF7Q6Q0C0 670 aa14.87□□□□□ -0.03
CNOT9-208ENST00000542068 AKAP14Q86UN6 197 aa14.87□□□□□ -0.03
CNOT9-208ENST00000542068 SLIRPQ9GZT3 109 aaKnown RBP14.87□□□□□ -0.03
CNOT9-208ENST00000542068 REEP1Q9H902 201 aa14.87□□□□□ -0.03
CNOT9-208ENST00000542068 THUMPD1Q9NXG2 353 aaKnown RBP14.87□□□□□ -0.03
CNOT9-208ENST00000542068 GLYATL1P3A0A0U1RQE8 302 aa14.87□□□□□ -0.03
CNOT9-208ENST00000542068 A0A1W2PRU2 124 aa14.87□□□□□ -0.03
CNOT9-208ENST00000542068 SSX4O60224 188 aa14.87□□□□□ -0.03
CNOT9-208ENST00000542068 FABP3P05413 133 aa14.87□□□□□ -0.03
CNOT9-208ENST00000542068 PBLDP30039 288 aaPredicted RBP14.87□□□□□ -0.03
CNOT9-208ENST00000542068 RYKP34925 604 aa14.87□□□□□ -0.03
CNOT9-208ENST00000542068 CTSOP43234 321 aaPredicted RBP14.87□□□□□ -0.03
CNOT9-208ENST00000542068 CACNG1Q06432 222 aa14.87□□□□□ -0.03
CNOT9-208ENST00000542068 MAD2L1BPQ15013 274 aaPredicted RBP14.87□□□□□ -0.03
CNOT9-208ENST00000542068 SHQ1Q6PI26 577 aaKnown RBP14.87□□□□□ -0.03
CNOT9-208ENST00000542068 ZNF461Q8TAF7 563 aa14.87□□□□□ -0.03
CNOT9-208ENST00000542068 KCNS3Q9BQ31 491 aa14.87□□□□□ -0.03
CNOT9-208ENST00000542068 FNDC1Q4ZHG4 1894 aaPredicted RBP14.87□□□□□ -0.03
CNOT9-208ENST00000542068 H3BNC9 293 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 CLIC1O00299 241 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 FPGTO14772 594 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 SLC16A6O15403 523 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 ALOX5P09917 674 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 HNF1BP35680 557 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 OR1E2P47887 323 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 ACOX1Q15067 660 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 FAM26DQ5JW98 314 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 ZNF648Q5T619 568 aaPredicted RBP14.86□□□□□ -0.03
CNOT9-208ENST00000542068 ITPKCQ96DU7 683 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 SPATA17Q96L03 361 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 MTERF1Q99551 399 aaKnown RBP14.86□□□□□ -0.03
CNOT9-208ENST00000542068 C2orf49Q9BVC5 232 aaPredicted RBP14.86□□□□□ -0.03
CNOT9-208ENST00000542068 OR51E2Q9H255 320 aa14.86□□□□□ -0.03
CNOT9-208ENST00000542068 IL26Q9NPH9 171 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms