RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 YBX1P67809 324 aaKnown RBP4.41□□□□□ -1.7
SNHG1-214ENST00000540865 GUCY1A3Q02108 690 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 OGDHQ02218 1023 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 DSC2Q02487 901 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 CACNG1Q06432 222 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 MAN2A1Q16706 1144 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 SLC5A12Q1EHB4 618 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 TUBB8Q3ZCM7 444 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 KHDC1Q4VXA5 237 aaKnown RBP4.41□□□□□ -1.7
SNHG1-214ENST00000540865 VWA3BQ502W6 1294 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 KRTCAP3Q53RY4 240 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 ZC3H12BQ5HYM0 836 aaKnown RBP4.41□□□□□ -1.7
SNHG1-214ENST00000540865 CES4AQ5XG92 561 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 ALS2CLQ60I27 953 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 METRNLQ641Q3 311 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 KRTAP5-3Q6L8H2 238 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 TLDC1Q6P9B6 456 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 FAM83HQ6ZRV2 1179 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-214ENST00000540865 MON1BQ7L1V2 547 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 OVCH1Q7RTY7 1134 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 FGD2Q7Z6J4 655 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 TMEM200AQ86VY9 491 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 KBTBD2Q8IY47 623 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 Q8N1Y9 231 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 OR11G2Q8NGC1 345 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 OR4E2Q8NGC2 313 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 ARRDC2Q8TBH0 407 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 CA5BP1Q8WTZ4 195 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 MAML1Q92585 1016 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 N4BP2L2Q92802 583 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-214ENST00000540865 FATE1Q969F0 183 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 FKBP10Q96AY3 582 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 EID2BQ96D98 161 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 TTC25Q96NG3 672 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 PEBP4Q96S96 227 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 PCDHB18PQ96TA0 734 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 VKORC1Q9BQB6 163 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 ZNF559Q9BR84 538 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 TUBGCP2Q9BSJ2 902 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 ADGRE3Q9BY15 652 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 SLC26A1Q9H2B4 701 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 NDST4Q9H3R1 872 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 IPPKQ9H8X2 491 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 WDR54Q9H977 334 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 SLC22A11Q9NSA0 550 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 TXLNGQ9NUQ3 528 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 ETNK2Q9NVF9 386 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 PCSK1NQ9UHG2 260 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 RWDD2AQ9UIY3 292 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 NXT1Q9UKK6 140 aaKnown RBP4.41□□□□□ -1.7
SNHG1-214ENST00000540865 TMPRSS11EQ9UL52 423 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 ACSL5Q9ULC5 683 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 EDARQ9UNE0 448 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 PSMD13Q9UNM6 376 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 MRPS2Q9Y399 296 aaKnown RBP4.41□□□□□ -1.7
SNHG1-214ENST00000540865 HEBP2Q9Y5Z4 205 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 CFAP20Q9Y6A4 193 aaKnown RBP4.41□□□□□ -1.7
SNHG1-214ENST00000540865 X6R8D5 127 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 AKAP6Q13023 2319 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 FER1L5A0AVI2 2057 aa4.41□□□□□ -1.7
SNHG1-214ENST00000540865 TLDC2A0PJX2 215 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 GOLGA6L4A6NEF3 574 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 MGAT4DA6NG13 374 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 C2orf74A8MZ97 194 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 H7BY64 318 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 BTN3A1O00481 513 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 PRRG2O14669 202 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 MATN3O15232 486 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 RNF8O76064 485 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 GFPT2O94808 682 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 HPP00738 406 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 C8BP07358 591 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 PYGMP11217 842 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 ATP1A3P13637 1013 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 ITGAXP20702 1163 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 DNASE1P24855 282 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 PSMA2P25787 234 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 MIPP30301 263 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 SOX5P35711 763 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 BUD31P41223 144 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-214ENST00000540865 GABRA4P48169 554 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 FOXL2P58012 376 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 ADAM8P78325 824 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 NIPAL4Q0D2K0 466 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 NFE2L1Q14494 772 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 KRT33BQ14525 404 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 SLC9A5Q14940 896 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 DPYSL2Q16555 572 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 CAMK4Q16566 473 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 RBBP7Q16576 425 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 KRTAP19-4Q3LI73 84 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 TMEM198Q66K66 360 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 TIGD7Q6NT04 549 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-214ENST00000540865 TMEM220Q6QAJ8 160 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 SYDE1Q6ZW31 735 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-214ENST00000540865 CYP4V2Q6ZWL3 525 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-214ENST00000540865 POLNQ7Z5Q5 900 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 CILP2Q8IUL8 1156 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 TMEM151BQ8IW70 566 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 EID3Q8N140 333 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms