RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 MED13Q9UHV7 2174 aa16.41■□□□□ 0.22
CACNA2D4-211ENST00000540728 ANKRD12Q6UB98 2062 aa16.41■□□□□ 0.22
CACNA2D4-211ENST00000540728 NBASA2RRP1 2371 aa16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 FAM187AA6NFU0 413 aa16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 SLC16A5O15375 505 aa16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 HIST1H2AGP0C0S8 130 aaPredicted RBP16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 HIST1H2ADP20671 130 aa16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 CDKN2DP55273 166 aa16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 IL2P60568 153 aa16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 YBX1P67809 324 aaKnown RBP16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 CALCOCO2Q13137 446 aa16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 FRG1Q14331 258 aaKnown RBP16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 MUM1Q2TAK8 710 aa16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 RBM20Q5T481 1227 aaKnown RBP16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 FRMPD2BQ6IN97 320 aa16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 FBXO42Q6P3S6 717 aa16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 PAQR3Q6TCH7 311 aa16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 OVCH1Q7RTY7 1134 aa16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 ADCK2Q7Z695 626 aa16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 MRGPREQ86SM8 312 aa16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 RERGQ96A58 199 aaPredicted RBP16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 HIST1H2AHQ96KK5 128 aa16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 HIST1H2AJQ99878 128 aa16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 H2AFJQ9BTM1 129 aa16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 PARVBQ9HBI1 364 aa16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 CCDC177Q9NQR7 707 aaPredicted RBP16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 ZFATQ9P243 1243 aa16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 NXT1Q9UKK6 140 aaKnown RBP16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 VWA7Q9Y334 891 aa16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 PCDHGB7Q9Y5F8 929 aa16.4■□□□□ 0.22
CACNA2D4-211ENST00000540728 HEATR5BQ9P2D3 2071 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 FLNCQ14315 2725 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 LOC105369274A0A096LPK9 316 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 LOC102723532A0A0G2JNH3 316 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 H0YGG7 62 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 ONECUT2O95948 504 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 EZRP15311 586 aaKnown RBP16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 HRH2P25021 359 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 IMPA1P29218 277 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 RPL21P46778 160 aaKnown RBP16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 ARF3P61204 181 aaPredicted RBP16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 ETF1P62495 437 aaKnown RBP16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 MGAT5Q09328 741 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 HECTD2Q5U5R9 776 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 FAM45BPQ6NSW5 357 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 PRMT9Q6P2P2 845 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 TRMT10BQ6PF06 316 aaKnown RBP16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 PAQR7Q86WK9 346 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 OR4N4Q8N0Y3 316 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 FBXO36Q8NEA4 188 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 SPATA4Q8NEY3 305 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 FAM45AQ8TCE6 357 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 LINGO1Q96FE5 620 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 CABS1Q96KC9 395 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 TRIM54Q9BYV2 358 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 PCBD2Q9H0N5 130 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 WDR54Q9H977 334 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 SLC22A11Q9NSA0 550 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 SLC17A6Q9P2U8 582 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 PDE10AQ9Y233 779 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 ZNF451Q9Y4E5 1061 aa16.39■□□□□ 0.21
CACNA2D4-211ENST00000540728 TXNDC9O14530 226 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 FANCGO15287 622 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 NRP2O60462 931 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 KLHL41O60662 606 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 PDGFAP04085 211 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 ITGAXP20702 1163 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 OR1D4P47884 311 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 EMP3P54852 163 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 TIAL1Q01085 375 aaKnown RBP eCLIP16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 RELAQ04206 551 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 IGFBP7Q16270 282 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 ZNF425Q6IV72 752 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 SPNS2Q8IVW8 549 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 ZBED8Q8IZ13 594 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 METTL27Q8N6F8 245 aaPredicted RBP16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 CSNK1A1LQ8N752 337 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 CLEC1AQ8NC01 280 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 COL26A1Q96A83 441 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 NACC2Q96BF6 587 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 VPS50Q96JG6 964 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 ERP44Q9BS26 406 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 SLC26A1Q9H2B4 701 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 PLAC1Q9HBJ0 212 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 ZNF304Q9HCX3 659 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 NSMCE4AQ9NXX6 385 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 WHRNQ9P202 907 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 STOX2Q9P2F5 926 aaPredicted RBP16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 ADAMTS6Q9UKP5 1117 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 CDC14AQ9UNH5 594 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 TNRC6AQ8NDV7 1962 aaKnown RBP16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 PTPN13Q12923 2485 aa16.38■□□□□ 0.21
CACNA2D4-211ENST00000540728 IGKV1-8A0A0C4DH67 115 aa16.37■□□□□ 0.21
CACNA2D4-211ENST00000540728 A6NL46 340 aa16.37■□□□□ 0.21
CACNA2D4-211ENST00000540728 E7ESA3 106 aa16.37■□□□□ 0.21
CACNA2D4-211ENST00000540728 PRPF4O43172 522 aaKnown RBP eCLIP16.37■□□□□ 0.211e-7■□□□□ 10.2
CACNA2D4-211ENST00000540728 CNOT3O75175 753 aaKnown RBP16.37■□□□□ 0.21
CACNA2D4-211ENST00000540728 CEACAM4O75871 244 aa16.37■□□□□ 0.21
CACNA2D4-211ENST00000540728 FDXRP22570 491 aa16.37■□□□□ 0.21
CACNA2D4-211ENST00000540728 CCND1P24385 295 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms