RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 FAM32AQ9Y421 112 aaKnown RBP11.94□□□□□ -0.5
NPC1-202ENST00000540608 HTR3EA5X5Y0 456 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 K7ERQ8 282 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 SCAMP3O14828 347 aaKnown RBP11.93□□□□□ -0.5
NPC1-202ENST00000540608 WBP4O75554 376 aaKnown RBP11.93□□□□□ -0.5
NPC1-202ENST00000540608 C1QCP02747 245 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 GALTP07902 379 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 KRT20P35900 424 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 RPP38P78345 283 aaKnown RBP11.93□□□□□ -0.5
NPC1-202ENST00000540608 UBE2UQ5VVX9 321 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 FAHD1Q6P587 224 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 CBLL1Q75N03 491 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 EIF3MQ7L2H7 374 aaKnown RBP11.93□□□□□ -0.5
NPC1-202ENST00000540608 VTCN1Q7Z7D3 282 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 PLD3Q8IV08 490 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 CBARPQ8N350 705 aaPredicted RBP11.93□□□□□ -0.5
NPC1-202ENST00000540608 ATG16L2Q8NAA4 619 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 FBXO22Q8NEZ5 403 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 OR6K2Q8NGY2 324 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 UBE2FQ969M7 185 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 HERC2P3Q9BVR0 1158 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 TM6SF2Q9BZW4 377 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 DSN1Q9H410 356 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 PCDH12Q9NPG4 1184 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 TRPM5Q9NZQ8 1165 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 KIF17Q9P2E2 1029 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 STOML2Q9UJZ1 356 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 GPC6Q9Y625 555 aaPredicted RBP11.93□□□□□ -0.5
NPC1-202ENST00000540608 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.93□□□□□ -0.5
NPC1-202ENST00000540608 SERTM1A2A2V5 107 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 EFCAB9A8MZ26 197 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 FPGTO14772 594 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 DPM1O60762 260 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 HMGA1P17096 107 aaKnown RBP11.93□□□□□ -0.5
NPC1-202ENST00000540608 AMD1P17707 334 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 PRPS1L1P21108 318 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 CD40LGP29965 261 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 SPAM1P38567 509 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 NSG1P42857 185 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 PPP3CCP48454 512 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 BCL2L1Q07817 233 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 NPRL3Q12980 569 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 TCTN1Q2MV58 587 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 ZXDCQ2QGD7 858 aaPredicted RBP11.93□□□□□ -0.5
NPC1-202ENST00000540608 NOXRED1Q6NXP6 359 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 SLC22A16Q86VW1 577 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 LACC1Q8IV20 430 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 SLC22A15Q8IZD6 547 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 TCAIMQ8N3R3 496 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 L3MBTL4Q8NA19 623 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 RPL3LQ92901 407 aaKnown RBP11.93□□□□□ -0.5
NPC1-202ENST00000540608 HPS1Q92902 700 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 ZHX1-C8orf76Q96EF9 292 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 PANX1Q96RD7 426 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 MYOCQ99972 504 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 ELAC1Q9H777 363 aaKnown RBP11.93□□□□□ -0.5
NPC1-202ENST00000540608 REEP1Q9H902 201 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 RASSF1Q9NS23 344 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 SCHIP1Q9P0W5 487 aaPredicted RBP11.93□□□□□ -0.5
NPC1-202ENST00000540608 ANKMY1Q9P2S6 941 aa11.93□□□□□ -0.5
NPC1-202ENST00000540608 MICAL3Q7RTP6 2002 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 A0A1W2PQ45 241 aaPredicted RBP11.92□□□□□ -0.5
NPC1-202ENST00000540608 A0A1W2PQY0 241 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 AGAP14A8MT82 685 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 PCDHGA12O60330 932 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 FKBP9O95302 570 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 LCKP06239 509 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 BMP1P13497 986 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 UGT2B10P36537 528 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 CSKP41240 450 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 ITGA1P56199 1179 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 TUBA1BP68363 451 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 CREMQ03060 361 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 SRSF11Q05519 484 aaKnown RBP11.92□□□□□ -0.5
NPC1-202ENST00000540608 CATSPEREQ5SY80 951 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 TUBA1AQ71U36 451 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 PTOV1Q86YD1 416 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 CPA6Q8N4T0 437 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 SLC38A4Q969I6 547 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 ALG14Q96F25 216 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 HSH2DQ96JZ2 352 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 APOLD1Q96LR9 279 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 REXO4Q9GZR2 422 aaKnown RBP11.92□□□□□ -0.5
NPC1-202ENST00000540608 THUMPD1Q9NXG2 353 aaKnown RBP11.92□□□□□ -0.5
NPC1-202ENST00000540608 EPN2O95208 641 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 PARNO95453 639 aaKnown RBP11.92□□□□□ -0.5
NPC1-202ENST00000540608 CDC20Q12834 499 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 ZNF621Q6ZSS3 439 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 UBE2R2Q712K3 238 aaPredicted RBP11.92□□□□□ -0.5
NPC1-202ENST00000540608 GALNT10Q86SR1 603 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 KIAA1958Q8N8K9 716 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 MCFD2Q8NI22 146 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 CSGALNACT1Q8TDX6 532 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 APH1BQ8WW43 257 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 FCGR1BQ92637 280 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 DACH2Q96NX9 599 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 SLC12A9Q9BXP2 914 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 ITPAQ9BY32 194 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 MMP27Q9H306 513 aa11.92□□□□□ -0.5
NPC1-202ENST00000540608 SACM1LQ9NTJ5 587 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms