RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 RAPSNQ13702 412 aa20.02■□□□□ 0.8
CHFR-217ENST00000540537 MUM1Q2TAK8 710 aa20.02■□□□□ 0.8
CHFR-217ENST00000540537 PRTGQ2VWP7 1150 aa20.02■□□□□ 0.8
CHFR-217ENST00000540537 SPANXN3Q5MJ09 141 aa20.02■□□□□ 0.8
CHFR-217ENST00000540537 ZNF425Q6IV72 752 aa20.02■□□□□ 0.8
CHFR-217ENST00000540537 LRRC8EQ6NSJ5 796 aa20.02■□□□□ 0.8
CHFR-217ENST00000540537 UGT3A1Q6NUS8 523 aa20.02■□□□□ 0.8
CHFR-217ENST00000540537 CPNE9Q8IYJ1 553 aa20.02■□□□□ 0.8
CHFR-217ENST00000540537 EFCAB3Q8N7B9 438 aa20.02■□□□□ 0.8
CHFR-217ENST00000540537 ATP13A2Q9NQ11 1180 aa20.02■□□□□ 0.8
CHFR-217ENST00000540537 CDC23Q9UJX2 597 aa20.02■□□□□ 0.8
CHFR-217ENST00000540537 SHANK1Q9Y566 2161 aa20.01■□□□□ 0.79
CHFR-217ENST00000540537 CLEC18AA5D8T8 446 aa20.01■□□□□ 0.79
CHFR-217ENST00000540537 VSTM2BA6NLU5 285 aa20.01■□□□□ 0.79
CHFR-217ENST00000540537 MED26O95402 600 aa20.01■□□□□ 0.79
CHFR-217ENST00000540537 SYF2O95926 243 aaKnown RBP20.01■□□□□ 0.79
CHFR-217ENST00000540537 RELAQ04206 551 aa20.01■□□□□ 0.79
CHFR-217ENST00000540537 SLC6A19Q695T7 634 aa20.01■□□□□ 0.79
CHFR-217ENST00000540537 CLEC18BQ6UXF7 455 aa20.01■□□□□ 0.79
CHFR-217ENST00000540537 UBE2R2Q712K3 238 aaPredicted RBP20.01■□□□□ 0.79
CHFR-217ENST00000540537 PIWIL4Q7Z3Z4 852 aaKnown RBP20.01■□□□□ 0.79
CHFR-217ENST00000540537 SPNS2Q8IVW8 549 aa20.01■□□□□ 0.79
CHFR-217ENST00000540537 CNTN4Q8IWV2 1026 aa20.01■□□□□ 0.79
CHFR-217ENST00000540537 LRRC56Q8IYG6 542 aaPredicted RBP20.01■□□□□ 0.79
CHFR-217ENST00000540537 DTWD1Q8N5C7 304 aa20.01■□□□□ 0.79
CHFR-217ENST00000540537 METTL27Q8N6F8 245 aaPredicted RBP20.01■□□□□ 0.79
CHFR-217ENST00000540537 CLEC18CQ8NCF0 446 aa20.01■□□□□ 0.79
CHFR-217ENST00000540537 PPFIBP2Q8ND30 876 aa20.01■□□□□ 0.79
CHFR-217ENST00000540537 PNPLA2Q96AD5 504 aa20.01■□□□□ 0.79
CHFR-217ENST00000540537 C10orf90Q96M02 699 aa20.01■□□□□ 0.79
CHFR-217ENST00000540537 SOX17Q9H6I2 414 aaPredicted RBP20.01■□□□□ 0.79
CHFR-217ENST00000540537 ZNF304Q9HCX3 659 aa20.01■□□□□ 0.79
CHFR-217ENST00000540537 TRMT6Q9UJA5 497 aaKnown RBP20.01■□□□□ 0.79
CHFR-217ENST00000540537 MAP4K5Q9Y4K4 846 aa20.01■□□□□ 0.79
CHFR-217ENST00000540537 MAU2Q9Y6X3 613 aa20.01■□□□□ 0.79
CHFR-217ENST00000540537 DOCK10Q96BY6 2186 aa20.01■□□□□ 0.79
CHFR-217ENST00000540537 SMAPO00193 183 aa20■□□□□ 0.79
CHFR-217ENST00000540537 SOCS6O14544 535 aa20■□□□□ 0.79
CHFR-217ENST00000540537 IPO13O94829 963 aaKnown RBP20■□□□□ 0.79
CHFR-217ENST00000540537 EZRP15311 586 aaKnown RBP20■□□□□ 0.79
CHFR-217ENST00000540537 IVDP26440 423 aa20■□□□□ 0.79
CHFR-217ENST00000540537 IMPA1P29218 277 aa20■□□□□ 0.79
CHFR-217ENST00000540537 AIMP2Q13155 320 aaKnown RBP20■□□□□ 0.79
CHFR-217ENST00000540537 UBAP2LQ14157 1087 aaKnown RBP20■□□□□ 0.79
CHFR-217ENST00000540537 MSS51Q4VC12 460 aa20■□□□□ 0.79
CHFR-217ENST00000540537 KIAA0408Q6ZU52 694 aa20■□□□□ 0.79
CHFR-217ENST00000540537 SYDE1Q6ZW31 735 aaPredicted RBP20■□□□□ 0.79
CHFR-217ENST00000540537 Q8NA96 180 aa20■□□□□ 0.79
CHFR-217ENST00000540537 GALNT11Q8NCW6 608 aa20■□□□□ 0.79
CHFR-217ENST00000540537 COL26A1Q96A83 441 aa20■□□□□ 0.79
CHFR-217ENST00000540537 VPS50Q96JG6 964 aa20■□□□□ 0.79
CHFR-217ENST00000540537 CABS1Q96KC9 395 aa20■□□□□ 0.79
CHFR-217ENST00000540537 RUNDC3BQ96NL0 473 aa20■□□□□ 0.79
CHFR-217ENST00000540537 MFRPQ9BY79 579 aa20■□□□□ 0.79
CHFR-217ENST00000540537 ZNF552Q9H707 407 aaPredicted RBP20■□□□□ 0.79
CHFR-217ENST00000540537 SEMA3GQ9NS98 782 aa20■□□□□ 0.79
CHFR-217ENST00000540537 TAS2R13Q9NYV9 303 aa20■□□□□ 0.79
CHFR-217ENST00000540537 FBXL4Q9UKA2 621 aa20■□□□□ 0.79
CHFR-217ENST00000540537 HS3ST3B1Q9Y662 390 aa20■□□□□ 0.79
CHFR-217ENST00000540537 USP27XA6NNY8 438 aa19.99■□□□□ 0.79
CHFR-217ENST00000540537 VPS4BO75351 444 aa19.99■□□□□ 0.79
CHFR-217ENST00000540537 BANF1O75531 89 aa19.99■□□□□ 0.79
CHFR-217ENST00000540537 CARSP49589 748 aaKnown RBP19.99■□□□□ 0.79
CHFR-217ENST00000540537 RGS4P49798 205 aa19.99■□□□□ 0.79
CHFR-217ENST00000540537 TIAL1Q01085 375 aaKnown RBP eCLIP19.99■□□□□ 0.79
CHFR-217ENST00000540537 BBS9Q3SYG4 887 aa19.99■□□□□ 0.79
CHFR-217ENST00000540537 GARNL3Q5VVW2 1013 aa19.99■□□□□ 0.79
CHFR-217ENST00000540537 IGFL3Q6UXB1 125 aa19.99■□□□□ 0.79
CHFR-217ENST00000540537 SHISA6Q6ZSJ9 500 aa19.99■□□□□ 0.79
CHFR-217ENST00000540537 GALNT7Q86SF2 657 aa19.99■□□□□ 0.79
CHFR-217ENST00000540537 CSNK1A1LQ8N752 337 aa19.99■□□□□ 0.79
CHFR-217ENST00000540537 MVB12AQ96EY5 273 aa19.99■□□□□ 0.79
CHFR-217ENST00000540537 OR2A5Q96R48 311 aa19.99■□□□□ 0.79
CHFR-217ENST00000540537 NDNQ99608 321 aa19.99■□□□□ 0.79
CHFR-217ENST00000540537 SLAMF7Q9NQ25 335 aa19.99■□□□□ 0.79
CHFR-217ENST00000540537 ZNF282Q9UDV7 671 aaPredicted RBP19.99■□□□□ 0.79
CHFR-217ENST00000540537 VPS4AQ9UN37 437 aa19.99■□□□□ 0.79
CHFR-217ENST00000540537 CDC14AQ9UNH5 594 aa19.99■□□□□ 0.79
CHFR-217ENST00000540537 IGLV3-12A0A075B6K2 115 aa19.98■□□□□ 0.79
CHFR-217ENST00000540537 MASP2O00187 686 aa19.98■□□□□ 0.79
CHFR-217ENST00000540537 FBLP22087 321 aaKnown RBP19.98■□□□□ 0.79
CHFR-217ENST00000540537 VARSP26640 1264 aaKnown RBP19.98■□□□□ 0.79
CHFR-217ENST00000540537 GABRB3P28472 473 aa19.98■□□□□ 0.79
CHFR-217ENST00000540537 OCA2Q04671 838 aa19.98■□□□□ 0.79
CHFR-217ENST00000540537 SP140Q13342 867 aa19.98■□□□□ 0.79
CHFR-217ENST00000540537 MORF4L2Q15014 288 aa19.98■□□□□ 0.79
CHFR-217ENST00000540537 INPP5JQ15735 1006 aaPredicted RBP19.98■□□□□ 0.79
CHFR-217ENST00000540537 RBBP7Q16576 425 aa19.98■□□□□ 0.79
CHFR-217ENST00000540537 PRAMEF13Q5VWM6 474 aa19.98■□□□□ 0.79
CHFR-217ENST00000540537 KIRREL2Q6UWL6 708 aa19.98■□□□□ 0.79
CHFR-217ENST00000540537 CREG2Q8IUH2 290 aa19.98■□□□□ 0.79
CHFR-217ENST00000540537 IGDCC3Q8IVU1 814 aa19.98■□□□□ 0.79
CHFR-217ENST00000540537 PDIK1LQ8N165 341 aa19.98■□□□□ 0.79
CHFR-217ENST00000540537 FAM26EQ8N5C1 309 aa19.98■□□□□ 0.79
CHFR-217ENST00000540537 STT3BQ8TCJ2 826 aa19.98■□□□□ 0.79
CHFR-217ENST00000540537 MCOLN3Q8TDD5 553 aa19.98■□□□□ 0.79
CHFR-217ENST00000540537 TM9SF4Q92544 642 aa19.98■□□□□ 0.79
CHFR-217ENST00000540537 RERGQ96A58 199 aaPredicted RBP19.98■□□□□ 0.79
CHFR-217ENST00000540537 CERS2Q96G23 380 aa19.98■□□□□ 0.79
CHFR-217ENST00000540537 CAPZA3Q96KX2 299 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms