RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 ATP4BP51164 291 aa8.47□□□□□ -1.05
DDB1-217ENST00000540166 OLR1P78380 273 aa8.47□□□□□ -1.05
DDB1-217ENST00000540166 INCA1Q0VD86 236 aa8.47□□□□□ -1.05
DDB1-217ENST00000540166 CRY1Q16526 586 aa8.47□□□□□ -1.05
DDB1-217ENST00000540166 SPATS1Q496A3 300 aa8.47□□□□□ -1.05
DDB1-217ENST00000540166 PYDC2Q56P42 97 aa8.47□□□□□ -1.05
DDB1-217ENST00000540166 PCID2Q5JVF3 399 aa8.47□□□□□ -1.05
DDB1-217ENST00000540166 RBM20Q5T481 1227 aaKnown RBP8.47□□□□□ -1.05
DDB1-217ENST00000540166 FAM205BPQ63HN1 556 aa8.47□□□□□ -1.05
DDB1-217ENST00000540166 PARM1Q6UWI2 310 aa8.47□□□□□ -1.05
DDB1-217ENST00000540166 BEND5Q7L4P6 421 aa8.47□□□□□ -1.05
DDB1-217ENST00000540166 RETREG3Q86VR2 466 aa8.47□□□□□ -1.05
DDB1-217ENST00000540166 LSMEM2Q8N112 164 aa8.47□□□□□ -1.05
DDB1-217ENST00000540166 OR6F1Q8NGZ6 308 aa8.47□□□□□ -1.05
DDB1-217ENST00000540166 DYNC2LI1Q8TCX1 351 aa8.47□□□□□ -1.05
DDB1-217ENST00000540166 SPACA7Q96KW9 195 aa8.47□□□□□ -1.05
DDB1-217ENST00000540166 TLR8Q9NR97 1041 aaKnown RBP8.47□□□□□ -1.05
DDB1-217ENST00000540166 TDP1Q9NUW8 608 aa8.47□□□□□ -1.05
DDB1-217ENST00000540166 OR12D3Q9UGF7 316 aa8.47□□□□□ -1.05
DDB1-217ENST00000540166 INVSQ9Y283 1065 aa8.47□□□□□ -1.05
DDB1-217ENST00000540166 FAM240BA0A1B0GVZ2 78 aa8.46□□□□□ -1.05
DDB1-217ENST00000540166 UBA6A0AVT1 1052 aaPredicted RBP8.46□□□□□ -1.05
DDB1-217ENST00000540166 TMEM189-UBE2V1I3L0A0 370 aa8.46□□□□□ -1.05
DDB1-217ENST00000540166 ERN1O75460 977 aaKnown RBP8.46□□□□□ -1.05
DDB1-217ENST00000540166 ALPLP05186 524 aa8.46□□□□□ -1.05
DDB1-217ENST00000540166 SLC35E2BP0CK96 405 aa8.46□□□□□ -1.05
DDB1-217ENST00000540166 CAPN3P20807 821 aa8.46□□□□□ -1.05
DDB1-217ENST00000540166 DDX6P26196 483 aaKnown RBP eCLIP8.46□□□□□ -1.05
DDB1-217ENST00000540166 IDH2P48735 452 aaKnown RBP8.46□□□□□ -1.05
DDB1-217ENST00000540166 RAB25P57735 213 aa8.46□□□□□ -1.05
DDB1-217ENST00000540166 GPLD1P80108 840 aa8.46□□□□□ -1.05
DDB1-217ENST00000540166 CDK5R2Q13319 367 aa8.46□□□□□ -1.05
DDB1-217ENST00000540166 HECTD3Q5T447 861 aa8.46□□□□□ -1.05
DDB1-217ENST00000540166 ESRP1Q6NXG1 681 aaKnown RBP8.46□□□□□ -1.05
DDB1-217ENST00000540166 DTX3Q8N9I9 347 aa8.46□□□□□ -1.05
DDB1-217ENST00000540166 AKAP1Q92667 903 aaKnown RBP eCLIP8.46□□□□□ -1.05
DDB1-217ENST00000540166 SLC39A13Q96H72 371 aa8.46□□□□□ -1.05
DDB1-217ENST00000540166 GFM1Q96RP9 751 aaKnown RBP8.46□□□□□ -1.05
DDB1-217ENST00000540166 TKTL2Q9H0I9 626 aa8.46□□□□□ -1.05
DDB1-217ENST00000540166 AMBNQ9NP70 447 aa8.46□□□□□ -1.05
DDB1-217ENST00000540166 POLMQ9NP87 494 aaPredicted RBP8.46□□□□□ -1.05
DDB1-217ENST00000540166 RBM22Q9NW64 420 aaKnown RBP eCLIP8.46□□□□□ -1.055e-7■■■■■ 29.3
DDB1-217ENST00000540166 RCOR3Q9P2K3 495 aaPredicted RBP8.46□□□□□ -1.05
DDB1-217ENST00000540166 DNMT3BQ9UBC3 853 aaKnown RBP8.46□□□□□ -1.05
DDB1-217ENST00000540166 SARDHQ9UL12 918 aa8.46□□□□□ -1.05
DDB1-217ENST00000540166 DUSP12Q9UNI6 340 aa8.46□□□□□ -1.05
DDB1-217ENST00000540166 R4GN57 208 aa8.46□□□□□ -1.05
DDB1-217ENST00000540166 CITO14578 2027 aa8.46□□□□□ -1.05
DDB1-217ENST00000540166 MTMR11A4FU01 709 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 DLGAP1O14490 977 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 ADAM12O43184 909 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 MT-CYBP00156 380 aaPredicted RBP8.46□□□□□ -1.06
DDB1-217ENST00000540166 AHSGP02765 367 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 CEBPBP17676 345 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 NUDT1P36639 197 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 DDOSTP39656 456 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 MADCAM1Q13477 382 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 PDGFRLQ15198 375 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 MED22Q15528 200 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 GPAT3Q53EU6 434 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 C2orf27AQ580R0 203 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 DGKKQ5KSL6 1271 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 SYPL2Q5VXT5 272 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 TMEM184AQ6ZMB5 413 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 SLC16A12Q6ZSM3 486 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 TOP6BLQ8N6T0 577 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 UTP15Q8TED0 518 aaKnown RBP8.46□□□□□ -1.06
DDB1-217ENST00000540166 IPCEF1Q8WWN9 437 aaPredicted RBP8.46□□□□□ -1.06
DDB1-217ENST00000540166 ACBD6Q9BR61 282 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 CIPCQ9C0C6 399 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 RETREG1Q9H6L5 497 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 RC3H2Q9HBD1 1191 aaKnown RBP8.46□□□□□ -1.06
DDB1-217ENST00000540166 SEMA4BQ9NPR2 832 aaPredicted RBP8.46□□□□□ -1.06
DDB1-217ENST00000540166 TIGARQ9NQ88 270 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 KRT84Q9NSB2 600 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 DNMT3LQ9UJW3 386 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 BDP1A6H8Y1 2624 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 BNIP3LO60238 219 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 LCKP06239 509 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 DHPSP49366 369 aaPredicted RBP8.46□□□□□ -1.06
DDB1-217ENST00000540166 SOX4Q06945 474 aaPredicted RBP8.46□□□□□ -1.06
DDB1-217ENST00000540166 ZNF284Q2VY69 593 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 DET1Q7L5Y6 550 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 ZNF605Q86T29 641 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 SYVN1Q86TM6 617 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 NPAS3Q8IXF0 933 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 UBQLNLQ8IYU4 475 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 CHPFQ8IZ52 775 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 HS3ST5Q8IZT8 346 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 ARL14EPQ8N8R7 260 aaPredicted RBP8.46□□□□□ -1.06
DDB1-217ENST00000540166 TTC29Q8NA56 475 aaPredicted RBP8.46□□□□□ -1.06
DDB1-217ENST00000540166 ACVR1CQ8NER5 493 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 OR52K2Q8NGK3 314 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 TEKT5Q96M29 485 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 TBL1YQ9BQ87 522 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 DEC1Q9P2X7 70 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 IKZF3Q9UKT9 509 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 SNX10Q9Y5X0 201 aa8.46□□□□□ -1.06
DDB1-217ENST00000540166 hCG_2039718K7EN88 272 aa8.45□□□□□ -1.06
DDB1-217ENST00000540166 CNTN5O94779 1100 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms