RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 GPRC5BQ9NZH0 403 aa14.87□□□□□ -0.03
DDB1-216ENST00000539739 KLHL3Q9UH77 587 aa14.87□□□□□ -0.03
DDB1-216ENST00000539739 PCDHGA4Q9Y5G9 962 aa14.87□□□□□ -0.03
DDB1-216ENST00000539739 BIRC5O15392 142 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 MAP3K7O43318 606 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 KATNA1O75449 491 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 SUPT7LO94864 414 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 KCNK5O95279 499 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 BPGMP07738 259 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 HOXB3P14651 431 aaPredicted RBP14.86□□□□□ -0.03
DDB1-216ENST00000539739 EPB42P16452 691 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 GNAZP19086 355 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 NR1D1P20393 614 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 HRH2P25021 359 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 ALDH3A1P30838 453 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 PPP1CAP62136 330 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 TMED1Q13445 227 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 PDK4Q16654 411 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 CFAP157Q5JU67 520 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 SNAP47Q5SQN1 464 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 ZNF678Q5SXM1 525 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 CACHD1Q5VU97 1274 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 TLDC1Q6P9B6 456 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 RBM44Q6ZP01 1051 aaKnown RBP14.86□□□□□ -0.03
DDB1-216ENST00000539739 SLCO6A1Q86UG4 719 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 NUDCD3Q8IVD9 361 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 TEX9Q8N6V9 391 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 L3HYPDHQ96EM0 354 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 MAP3K3Q99759 626 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 C1QTNF3Q9BXJ4 246 aa14.86□□□□□ -0.03
DDB1-216ENST00000539739 LRRC14BA6NHZ5 514 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 E2F3O00716 465 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 GIPC1O14908 333 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 CASC3O15234 703 aaKnown RBP14.85□□□□□ -0.03
DDB1-216ENST00000539739 TOX3O15405 576 aaPredicted RBP14.85□□□□□ -0.03
DDB1-216ENST00000539739 RPS17P08708 135 aaKnown RBP14.85□□□□□ -0.03
DDB1-216ENST00000539739 DHRS4L1P0CG22 281 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 MPSTP25325 297 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 NAGLUP54802 743 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 INSM1Q01101 510 aaPredicted RBP14.85□□□□□ -0.03
DDB1-216ENST00000539739 GTF2H2Q13888 395 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 GTF2H2CQ6P1K8 395 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 DHRS13Q6UX07 377 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 ARFGAP2Q8N6H7 521 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 CCNYL1Q8N7R7 359 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 PPP1R14CQ8TAE6 165 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 FLVCR1-AS1Q8TAF5 88 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 SLC5A11Q8WWX8 675 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 ATP6V1E2Q96A05 226 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 ZUFSPQ96AP4 578 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 TMEM74Q96NL1 305 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 TMEM237Q96Q45 408 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 OR4K3Q96R72 315 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 MECRQ9BV79 373 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 SEMA6CQ9H3T2 930 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 MLXIPLQ9NP71 852 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 TMEM9Q9P0T7 183 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 PDP2Q9P2J9 529 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 PCTPQ9UKL6 214 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 ASB1Q9Y576 335 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 CNOT1A5YKK6 2376 aaKnown RBP14.85□□□□□ -0.03
DDB1-216ENST00000539739 PCM1Q15154 2024 aa14.85□□□□□ -0.03
DDB1-216ENST00000539739 IGHV5-10-1A0A0J9YXX1 117 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 WDR91A4D1P6 747 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 TMX2-CTNND1H3BSU7 103 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 DKK1O94907 266 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 ARL4DP49703 201 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 TRA2AQ13595 282 aaKnown RBP eCLIP14.84□□□□□ -0.03
DDB1-216ENST00000539739 UNC50Q53HI1 259 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 KIAA1614Q5VZ46 1190 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 FBXW10Q5XX13 1052 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 ZNF574Q6ZN55 896 aaPredicted RBP14.84□□□□□ -0.03
DDB1-216ENST00000539739 PRSS42Q7Z5A4 293 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 GOLGA7Q7Z5G4 137 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 DPH7Q9BTV6 452 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 PITPNM3Q9BZ71 974 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 ANKMY1Q9P2S6 941 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 SNX7Q9UNH6 387 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 DCDC2BA2VCK2 349 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 A8MU76 341 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 H2AFYO75367 372 aaKnown RBP14.84□□□□□ -0.03
DDB1-216ENST00000539739 ZBTB11O95625 1053 aaPredicted RBP14.84□□□□□ -0.03
DDB1-216ENST00000539739 MT-CO3P00414 261 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 THRAP10827 490 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 CDH1P12830 882 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 WDR4P57081 412 aaKnown RBP14.84□□□□□ -0.03
DDB1-216ENST00000539739 PHF19Q5T6S3 580 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 FIGLAQ6QHK4 219 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 TMPRSS9Q7Z410 1059 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 ADCK2Q7Z695 626 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 KMT5CQ86Y97 462 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 FAM20CQ8IXL6 584 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 MDM1Q8TC05 714 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 NEIL2Q969S2 332 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 CCDC74BQ96LY2 380 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 PPM1MQ96MI6 270 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 TRAPPC9Q96Q05 1148 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 DEPDC7Q96QD5 511 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 IPPKQ9H8X2 491 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 TMEM184CQ9NVA4 438 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms