RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 SRSF11Q05519 484 aaKnown RBP9.39□□□□□ -0.91
CDH13-204ENST00000539548 CHRNA6Q15825 494 aa9.39□□□□□ -0.91
CDH13-204ENST00000539548 CDKN3Q16667 212 aa9.39□□□□□ -0.91
CDH13-204ENST00000539548 ZNF181Q2M3W8 571 aa9.39□□□□□ -0.91
CDH13-204ENST00000539548 ZNF404Q494X3 552 aa9.39□□□□□ -0.91
CDH13-204ENST00000539548 MLIPQ5VWP3 458 aa9.39□□□□□ -0.91
CDH13-204ENST00000539548 LRRC70Q7Z2Q7 622 aa9.39□□□□□ -0.91
CDH13-204ENST00000539548 PTOV1Q86YD1 416 aa9.39□□□□□ -0.91
CDH13-204ENST00000539548 CBARPQ8N350 705 aaPredicted RBP9.39□□□□□ -0.91
CDH13-204ENST00000539548 L3MBTL4Q8NA19 623 aa9.39□□□□□ -0.91
CDH13-204ENST00000539548 ATG16L2Q8NAA4 619 aa9.39□□□□□ -0.91
CDH13-204ENST00000539548 APH1BQ8WW43 257 aa9.39□□□□□ -0.91
CDH13-204ENST00000539548 UBE2FQ969M7 185 aa9.39□□□□□ -0.91
CDH13-204ENST00000539548 HRASLS5Q96KN8 279 aa9.39□□□□□ -0.91
CDH13-204ENST00000539548 ELOVL6Q9H5J4 265 aa9.39□□□□□ -0.91
CDH13-204ENST00000539548 REEP1Q9H902 201 aa9.39□□□□□ -0.91
CDH13-204ENST00000539548 CRLS1Q9UJA2 301 aa9.39□□□□□ -0.91
CDH13-204ENST00000539548 PNMA8BQ9ULN7 279 aaPredicted RBP9.39□□□□□ -0.91
CDH13-204ENST00000539548 FCF1Q9Y324 198 aaKnown RBP9.39□□□□□ -0.91
CDH13-204ENST00000539548 OR51B4Q9Y5P0 310 aa9.39□□□□□ -0.91
CDH13-204ENST00000539548 GLYATL1P3A0A0U1RQE8 302 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 METTL15A6NJ78 407 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 ZBBXA8MT70 800 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 PRMT3O60678 531 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 SCN2BO60939 215 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 LRATO95237 230 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 TRBC1P01850 177 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 C9P02748 559 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 COL6A1P12109 1028 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 BPIP17213 487 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 AMD1P17707 334 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 NEK2P51955 445 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 VEZF1Q14119 521 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 KCNJ8Q15842 424 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 IQCCQ4KMZ1 466 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 RTP2Q5QGT7 225 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 CCSAPQ6IQ19 270 aaPredicted RBP9.38□□□□□ -0.91
CDH13-204ENST00000539548 NEK5Q6P3R8 708 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 AHSA2Q719I0 299 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 GPR155Q7Z3F1 870 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 CYP2U1Q7Z449 544 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 VTCN1Q7Z7D3 282 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 RASAL3Q86YV0 1011 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 LYSMD2Q8IV50 215 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 NXPE1Q8N323 547 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 TCAIMQ8N3R3 496 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 PSMA8Q8TAA3 256 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 WBP2Q969T9 261 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 APIPQ96GX9 242 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 HSH2DQ96JZ2 352 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 EGLN2Q96KS0 407 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 FCRL1Q96LA6 429 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 EPYCQ99645 322 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 GABARAPL3Q9BY60 117 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 NXF2Q9GZY0 626 aaKnown RBP9.38□□□□□ -0.91
CDH13-204ENST00000539548 POLE4Q9NR33 117 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 RASSF1Q9NS23 344 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 MARCH5Q9NX47 278 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 SIRT5Q9NXA8 310 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 ARL15Q9NXU5 204 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 KIF17Q9P2E2 1029 aa9.38□□□□□ -0.91
CDH13-204ENST00000539548 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.37□□□□□ -0.91
CDH13-204ENST00000539548 AGAP14A8MT82 685 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 M0R082 166 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 EIF3FO00303 357 aaPredicted RBP9.37□□□□□ -0.91
CDH13-204ENST00000539548 AIREO43918 545 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 EPN2O95208 641 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 CELF2O95319 508 aaKnown RBP9.37□□□□□ -0.91
CDH13-204ENST00000539548 CLDN7O95471 211 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 C1QCP02747 245 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 GSTT2P0CG29 244 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 GSTT2BP0CG30 244 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 CKBP12277 381 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 BMP1P13497 986 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 HNF1BP35680 557 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 TGFBR1P36897 503 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 LIPAP38571 399 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 CLK1P49759 484 aaKnown RBP9.37□□□□□ -0.91
CDH13-204ENST00000539548 PTPN5P54829 565 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 WNT3P56703 355 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 ELP6Q0PNE2 266 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 MBTPS1Q14703 1052 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 MAPK11Q15759 364 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 ZXDCQ2QGD7 858 aaPredicted RBP9.37□□□□□ -0.91
CDH13-204ENST00000539548 DEPDC1Q5TB30 811 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 NOXRED1Q6NXP6 359 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 FUT10Q6P4F1 479 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 TRAF7Q6Q0C0 670 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 ANKS3Q6ZW76 656 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 ENTHD1Q8IYW4 607 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 ADGRG2Q8IZP9 1017 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 CSGALNACT1Q8TDX6 532 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 STARD8Q92502 1023 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 DNASE1L2Q92874 299 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 TXNDC15Q96J42 360 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 C7orf34Q96L11 122 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 APOLD1Q96LR9 279 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 PANX1Q96RD7 426 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 MYOCQ99972 504 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 CORO1BQ9BR76 489 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms