RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 OTUD3Q5T2D3 398 aaPredicted RBP13.57□□□□□ -0.24
LIMK1-208ENST00000538333 TTC33Q6PID6 262 aaPredicted RBP13.57□□□□□ -0.24
LIMK1-208ENST00000538333 ZNF786Q8N393 782 aa13.57□□□□□ -0.24
LIMK1-208ENST00000538333 FBXO15Q8NCQ5 510 aaPredicted RBP13.57□□□□□ -0.24
LIMK1-208ENST00000538333 FAM162AQ96A26 154 aa13.57□□□□□ -0.24
LIMK1-208ENST00000538333 SLC47A1Q96FL8 570 aa13.57□□□□□ -0.24
LIMK1-208ENST00000538333 MED8Q96G25 268 aa13.57□□□□□ -0.24
LIMK1-208ENST00000538333 REXO5Q96IC2 774 aaKnown RBP13.57□□□□□ -0.24
LIMK1-208ENST00000538333 METTL2AQ96IZ6 378 aaKnown RBP13.57□□□□□ -0.24
LIMK1-208ENST00000538333 REXO4Q9GZR2 422 aaKnown RBP13.57□□□□□ -0.24
LIMK1-208ENST00000538333 THG1LQ9NWX6 298 aaKnown RBP13.57□□□□□ -0.24
LIMK1-208ENST00000538333 DNAJB9Q9UBS3 223 aa13.57□□□□□ -0.24
LIMK1-208ENST00000538333 PRKAG2Q9UGJ0 569 aa13.57□□□□□ -0.24
LIMK1-208ENST00000538333 MAGED1Q9Y5V3 778 aaPredicted RBP13.57□□□□□ -0.24
LIMK1-208ENST00000538333 ATG2AQ2TAZ0 1938 aa13.57□□□□□ -0.24
LIMK1-208ENST00000538333 H0YAE9 185 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 K7ESM1 405 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 RFXANKO14593 260 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 HSD3B1P14060 373 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 MYOGP15173 224 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 IL1RNP18510 177 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 CDH2P19022 906 aaPredicted RBP13.56□□□□□ -0.24
LIMK1-208ENST00000538333 HSD3B2P26439 372 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 PBLDP30039 288 aaPredicted RBP13.56□□□□□ -0.24
LIMK1-208ENST00000538333 RBM23Q86U06 439 aaKnown RBP13.56□□□□□ -0.24
LIMK1-208ENST00000538333 TRIM74Q86UV6 250 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 SYT12Q8IV01 421 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 OFCC1Q8IZS5 231 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 TMIEQ8NEW7 156 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 OR7A2PQ8NGA2 310 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 NETO1Q8TDF5 533 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 ADAMTS16Q8TE57 1224 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 SMG7Q92540 1137 aaKnown RBP13.56□□□□□ -0.24
LIMK1-208ENST00000538333 TMIGD2Q96BF3 282 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 ZFYVE19Q96K21 471 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 MAGIXQ9H6Y5 334 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 BRF2Q9HAW0 419 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 ERVK-11Q9UQG0 969 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 RUVBL1Q9Y265 456 aaKnown RBP13.56□□□□□ -0.24
LIMK1-208ENST00000538333 COL4A3Q01955 1670 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 H3BSA7 217 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 RECQL5O94762 991 aaPredicted RBP13.56□□□□□ -0.24
LIMK1-208ENST00000538333 C1orf105O95561 183 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 ETHE1O95571 254 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 C1QCP02747 245 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 RB1P06400 928 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 TRPC1P48995 793 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 SRSF11Q05519 484 aaKnown RBP13.56□□□□□ -0.24
LIMK1-208ENST00000538333 ADNP2Q6IQ32 1131 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 ABRAXAS1Q6UWZ7 409 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 FKBP9P1Q75LS8 142 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 ZNF765Q7L2R6 523 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 GPR155Q7Z3F1 870 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 UBE2Q1Q7Z7E8 422 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 C12orf76Q8N812 135 aaPredicted RBP13.56□□□□□ -0.24
LIMK1-208ENST00000538333 OR8J2Q8NGG1 315 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 NELL1Q92832 810 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 MCOLN1Q9GZU1 580 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 VCX3AQ9NNX9 186 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 DPP7Q9UHL4 492 aa13.56□□□□□ -0.24
LIMK1-208ENST00000538333 A0A087WXM4 84 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 EDDM13A0A1B0GTR0 161 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 MAGEB17A8MXT2 336 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 H3BM21 787 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 HPRP00739 348 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 CST1P01037 141 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 MYCLP1P12525 358 aaPredicted RBP13.55□□□□□ -0.24
LIMK1-208ENST00000538333 IST1P53990 364 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 RAE1P78406 368 aaKnown RBP13.55□□□□□ -0.24
LIMK1-208ENST00000538333 DDX39BQ13838 428 aaKnown RBP13.55□□□□□ -0.24
LIMK1-208ENST00000538333 DUOXA1Q1HG43 343 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 FAM78AQ5JUQ0 283 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 DOK6Q6PKX4 331 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 ADGRD2Q7Z7M1 963 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 STK32CQ86UX6 486 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 SFTPA1Q8IWL2 248 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 ALDH16A1Q8IZ83 802 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 OR7G3Q8NG95 312 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 ZNF480Q8WV37 535 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 FOPNLQ96NB1 174 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 FAM129BQ96TA1 746 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 SGK2Q9HBY8 427 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 KIF26AQ9ULI4 1882 aaPredicted RBP13.55□□□□□ -0.24
LIMK1-208ENST00000538333 PLK4O00444 970 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 SEC24DO94855 1032 aaPredicted RBP13.55□□□□□ -0.24
LIMK1-208ENST00000538333 SERPINA1P01009 418 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 ALBP02768 609 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 C6P13671 934 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 ACSM2AQ08AH3 577 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 ELP6Q0PNE2 266 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 SF1Q15637 639 aaKnown RBP13.55□□□□□ -0.24
LIMK1-208ENST00000538333 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.55□□□□□ -0.24
LIMK1-208ENST00000538333 FNDC3BQ53EP0 1204 aaKnown RBP13.55□□□□□ -0.24
LIMK1-208ENST00000538333 ACSM2BQ68CK6 577 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 B3GNT6Q6ZMB0 384 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 SLCO4C1Q6ZQN7 724 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 SERPINA11Q86U17 422 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 ZDHHC13Q8IUH4 622 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 NPAS3Q8IXF0 933 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 OR8D1Q8WZ84 308 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms