RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 STX1AQ16623 288 aa10.55□□□□□ -0.72
CLPB-208ENST00000538021 MAPKAPK3Q16644 382 aa10.55□□□□□ -0.72
CLPB-208ENST00000538021 SYT16Q17RD7 645 aa10.55□□□□□ -0.72
CLPB-208ENST00000538021 DNAJC21Q5F1R6 531 aaKnown RBP10.55□□□□□ -0.72
CLPB-208ENST00000538021 TMEM211Q6ICI0 200 aa10.55□□□□□ -0.72
CLPB-208ENST00000538021 SLC25A25Q6KCM7 469 aa10.55□□□□□ -0.72
CLPB-208ENST00000538021 TMEM205Q6UW68 189 aa10.55□□□□□ -0.72
CLPB-208ENST00000538021 CRLF3Q8IUI8 442 aa10.55□□□□□ -0.72
CLPB-208ENST00000538021 CCDC71Q8IV32 467 aaPredicted RBP10.55□□□□□ -0.72
CLPB-208ENST00000538021 PIANPQ8IYJ0 282 aa10.55□□□□□ -0.72
CLPB-208ENST00000538021 MARVELD2Q8N4S9 558 aa10.55□□□□□ -0.72
CLPB-208ENST00000538021 OR2L8Q8NGY9 312 aa10.55□□□□□ -0.72
CLPB-208ENST00000538021 FAM57AQ8TBR7 257 aa10.55□□□□□ -0.72
CLPB-208ENST00000538021 RND1Q92730 232 aa10.55□□□□□ -0.72
CLPB-208ENST00000538021 P3H4Q92791 437 aa10.55□□□□□ -0.72
CLPB-208ENST00000538021 HDAC10Q969S8 669 aa10.55□□□□□ -0.72
CLPB-208ENST00000538021 MENTQ9BUN1 341 aa10.55□□□□□ -0.72
CLPB-208ENST00000538021 GBA3Q9H227 469 aa10.55□□□□□ -0.72
CLPB-208ENST00000538021 SLC24A3Q9HC58 644 aa10.55□□□□□ -0.72
CLPB-208ENST00000538021 MKKSQ9NPJ1 570 aaPredicted RBP10.55□□□□□ -0.72
CLPB-208ENST00000538021 TRHDEQ9UKU6 1024 aa10.55□□□□□ -0.72
CLPB-208ENST00000538021 A0A1B0GTH9 108 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 SUN1O94901 812 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 RPN2P04844 631 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 SP1P08047 785 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 OR56A5P0C7T3 313 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 PSMB5P28074 263 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 ADSLP30566 484 aaPredicted RBP10.54□□□□□ -0.72
CLPB-208ENST00000538021 PTGER1P34995 402 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 ADRA1AP35348 466 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 MEOX1P50221 254 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 HSPA14Q0VDF9 509 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 MSLNQ13421 630 aaPredicted RBP10.54□□□□□ -0.72
CLPB-208ENST00000538021 GRB7Q14451 532 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 MEP1AQ16819 746 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 RNFT1Q5M7Z0 435 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 MFSD4BQ5TF39 518 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 TMEM198Q66K66 360 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 PLAG1Q6DJT9 500 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 DCUN1D3Q8IWE4 304 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 CLYBLQ8N0X4 340 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 CPSF7Q8N684 471 aaKnown RBP10.54□□□□□ -0.72
CLPB-208ENST00000538021 HORMAD2Q8N7B1 307 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 AMER3Q8N944 861 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 LRRN4CLQ8ND94 238 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 GORASP1Q9BQQ3 440 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 PACSIN1Q9BY11 444 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 TGIF2Q9GZN2 237 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 C10orf88Q9H8K7 445 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 ZNF358Q9NW07 568 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 GNPTGQ9UJJ9 305 aa10.54□□□□□ -0.72
CLPB-208ENST00000538021 SCN2AQ99250 2005 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 A0A0A6YYC8 382 aaPredicted RBP10.53□□□□□ -0.72
CLPB-208ENST00000538021 FAM237BA0A1B0GVD1 139 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 USP27XA6NNY8 438 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 GABRR3A8MPY1 467 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 KIAA1324LA8MWY0 1029 aaPredicted RBP10.53□□□□□ -0.72
CLPB-208ENST00000538021 H0YGG7 62 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 I3L1I5 382 aaPredicted RBP10.53□□□□□ -0.72
CLPB-208ENST00000538021 PROM1O43490 865 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 MAN1A2O60476 641 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 CDC40O60508 579 aaKnown RBP eCLIP10.53□□□□□ -0.72
CLPB-208ENST00000538021 CTAG2O75638 210 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 FKBP9O95302 570 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 SLC26A3P40879 764 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 EFNA3P52797 238 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 ARF3P61204 181 aaPredicted RBP10.53□□□□□ -0.72
CLPB-208ENST00000538021 MAT1AQ00266 395 aaKnown RBP10.53□□□□□ -0.72
CLPB-208ENST00000538021 SPARCL1Q14515 664 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 PRPSAP1Q14558 356 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 HKDC1Q2TB90 917 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 PRTGQ2VWP7 1150 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 MINDY4Q4G0A6 757 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 ITPRIPL1Q6GPH6 555 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 LANCL3Q6ZV70 420 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 RNF44Q7L0R7 432 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 CPEB2Q7Z5Q1 589 aaKnown RBP10.53□□□□□ -0.72
CLPB-208ENST00000538021 PRIMA1Q86XR5 153 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 VRK3Q8IV63 474 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 CCDC50Q8IVM0 306 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 ZC3H7AQ8IWR0 971 aaKnown RBP10.53□□□□□ -0.72
CLPB-208ENST00000538021 SYN2Q92777 582 aaPredicted RBP10.53□□□□□ -0.72
CLPB-208ENST00000538021 MVB12AQ96EY5 273 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 RMND5BQ96G75 393 aaPredicted RBP10.53□□□□□ -0.72
CLPB-208ENST00000538021 CDKN2AIPNLQ96HQ2 116 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 PWWP2AQ96N64 755 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 NAP1L5Q96NT1 182 aaPredicted RBP10.53□□□□□ -0.72
CLPB-208ENST00000538021 QKIQ96PU8 341 aaKnown RBP eCLIP10.53□□□□□ -0.72
CLPB-208ENST00000538021 ALPK1Q96QP1 1244 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 ZFYVE21Q9BQ24 234 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 C19orf43Q9BQ61 176 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 TBL1YQ9BQ87 522 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 GPATCH1Q9BRR8 931 aaKnown RBP10.53□□□□□ -0.72
CLPB-208ENST00000538021 DDX56Q9NY93 547 aaKnown RBP10.53□□□□□ -0.72
CLPB-208ENST00000538021 LRFN1Q9P244 771 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 EDARQ9UNE0 448 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 RUVBL1Q9Y265 456 aaKnown RBP10.53□□□□□ -0.72
CLPB-208ENST00000538021 AAR2Q9Y312 384 aaKnown RBP10.53□□□□□ -0.72
CLPB-208ENST00000538021 HRH3Q9Y5N1 445 aa10.53□□□□□ -0.72
CLPB-208ENST00000538021 JMJD1CQ15652 2540 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms