RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 FOXM1Q08050 763 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 RPA4Q13156 261 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 C17orf107Q6ZR85 190 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 RYBPQ8N488 228 aaPredicted RBP10.4□□□□□ -0.75
RTN3-208ENST00000537981 CDYL2Q8N8U2 506 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 TTC29Q8NA56 475 aaPredicted RBP10.4□□□□□ -0.75
RTN3-208ENST00000537981 KBTBD8Q8NFY9 601 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 OR52K2Q8NGK3 314 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 SLC9A6Q92581 669 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 RBPMSQ93062 196 aaKnown RBP10.4□□□□□ -0.75
RTN3-208ENST00000537981 GMCL1Q96IK5 515 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 GPR137Q96N19 417 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 MRPL45Q9BRJ2 306 aaKnown RBP10.4□□□□□ -0.75
RTN3-208ENST00000537981 CNPPD1Q9BV87 410 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 ZC3H12CQ9C0D7 883 aaKnown RBP10.4□□□□□ -0.75
RTN3-208ENST00000537981 SP110Q9HB58 689 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 OBP2AQ9NY56 170 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 MALT1Q9UDY8 824 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 PCOLCE2Q9UKZ9 415 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 ZNF451Q9Y4E5 1061 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 SYNDIG1LA6NDD5 238 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 MYO1GB0I1T2 1018 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 STX7O15400 261 aaKnown RBP10.39□□□□□ -0.75
RTN3-208ENST00000537981 ARIH2O95376 493 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 PLATP00750 562 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 ERCC2P18074 760 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 NFKB1P19838 968 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 CSKP41240 450 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 POLR2JP52435 117 aaKnown RBP10.39□□□□□ -0.75
RTN3-208ENST00000537981 GTF2H3Q13889 308 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 GTDC1Q4AE62 458 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 NOMO2Q5JPE7 1267 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 PLBD1Q6P4A8 553 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 FAM131AQ6UXB0 335 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 TMPRSS11AQ6ZMR5 421 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 RASAL3Q86YV0 1011 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 PSTKQ8IV42 348 aaKnown RBP10.39□□□□□ -0.75
RTN3-208ENST00000537981 OR5K1Q8NHB7 308 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 SPATA22Q8NHS9 363 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 MYO19Q96H55 970 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 TINAGL1Q9GZM7 467 aaPredicted RBP10.39□□□□□ -0.75
RTN3-208ENST00000537981 TTYH1Q9H313 450 aaPredicted RBP10.39□□□□□ -0.75
RTN3-208ENST00000537981 RANBP3Q9H6Z4 567 aaPredicted RBP10.39□□□□□ -0.75
RTN3-208ENST00000537981 SNTG1Q9NSN8 517 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 PIM2Q9P1W9 311 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 TSPAN16Q9UKR8 245 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 MGAT4AQ9UM21 535 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 LOC102723532A0A0G2JNH3 316 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 K7ERI5 159 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 MUSKO15146 869 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 HCRTO43612 131 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 SEC22BO75396 215 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 HLA-DOAP06340 250 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 ACSM4P0C7M7 580 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 SUPT20HL2P0C7V6 817 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 LBPP18428 481 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 HLA-DMAP28067 261 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 CENPAP49450 140 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 KCNQ1P51787 676 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 ASAH1Q13510 395 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 KCNC3Q14003 757 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 QPRTQ15274 297 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 TSTQ16762 297 aaKnown RBP10.39□□□□□ -0.75
RTN3-208ENST00000537981 SOWAHAQ2M3V2 549 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 USP39Q53GS9 565 aaKnown RBP10.39□□□□□ -0.75
RTN3-208ENST00000537981 KCTD11Q693B1 232 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 SWSAP1Q6NVH7 229 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 ENKURQ8TC29 256 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 PROKR1Q8TCW9 393 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 ZNF578Q96N58 590 aaPredicted RBP10.39□□□□□ -0.75
RTN3-208ENST00000537981 RBP7Q96R05 134 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 MIXL1Q9H2W2 232 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 ATXN3LQ9H3M9 355 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 MUC13Q9H3R2 512 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 TRIM45Q9H8W5 580 aaPredicted RBP10.39□□□□□ -0.75
RTN3-208ENST00000537981 GBA2Q9HCG7 927 aaPredicted RBP10.39□□□□□ -0.75
RTN3-208ENST00000537981 ABCB9Q9NP78 766 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 RAD18Q9NS91 495 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 POLLQ9UGP5 575 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 SIX4Q9UIU6 781 aa10.39□□□□□ -0.75
RTN3-208ENST00000537981 NDRG2Q9UN36 371 aaKnown RBP10.39□□□□□ -0.75
RTN3-208ENST00000537981 TCRBV16S1A1N1A0A5B0 115 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 SLC22A23A1A5C7 686 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 AZIN1O14977 448 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 EPOP01588 193 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 CHRM5P08912 532 aaPredicted RBP10.38□□□□□ -0.75
RTN3-208ENST00000537981 HOXC6P09630 235 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 RRASP10301 218 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 CPB1P15086 417 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 EFNA1P20827 205 aaPredicted RBP10.38□□□□□ -0.75
RTN3-208ENST00000537981 CHRNA4P43681 627 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 NR2C2P49116 596 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 GBX2P52951 348 aaPredicted RBP10.38□□□□□ -0.75
RTN3-208ENST00000537981 BNC1Q01954 994 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 SSX1Q16384 188 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 DACT2Q5SW24 774 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 CPZQ66K79 652 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 KDM4DQ6B0I6 523 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 GPR139Q6DWJ6 353 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 APOBEC3HQ6NTF7 200 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms