RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 CLDN25C9JDP6 229 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 ASNA1O43681 348 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 SNX2O60749 519 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 NDUFS2O75306 463 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 PRR35P0CG20 571 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 RAP2AP10114 183 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 UROSP10746 265 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 THRBP10828 461 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 HLA-DPA1P20036 260 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 MAOBP27338 520 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 EEF1DP29692 281 aaKnown RBP11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 SGSHP51688 502 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 TPD52P55327 224 aaPredicted RBP11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 SHC2P98077 582 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 EMX2Q04743 252 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 ACVR1Q04771 509 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 CLCQ05315 142 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 CHRNB3Q05901 458 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 EIF4EBP2Q13542 120 aaPredicted RBP11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 ENPP2Q13822 863 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 NEDD8Q15843 81 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 ST3GAL2Q16842 350 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 MPPE1Q53F39 396 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 PITRM1Q5JRX3 1037 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 ATAD3BQ5T9A4 648 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 MARC1Q5VT66 337 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 IDO2Q6ZQW0 420 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 TAS2R42Q7RTR8 314 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 HID1Q8IV36 788 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 FBXO39Q8N4B4 442 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 OR2I1PQ8NGU4 316 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 CEP76Q8TAP6 659 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 ANKRD49Q8WVL7 239 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 CAPSLQ8WWF8 208 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 KIAA1191Q96A73 305 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 FBXL20Q96IG2 436 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 C3orf30Q96M34 536 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 HSPA12BQ96MM6 686 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 CHID1Q9BWS9 393 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 C1QTNF3Q9BXJ4 246 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 CIPCQ9C0C6 399 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 DERL2Q9GZP9 239 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 HOXD1Q9GZZ0 328 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 MKRN2Q9H000 416 aaKnown RBP11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 CAPN10Q9HC96 672 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 ATPIF1Q9UII2 106 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 NEU3Q9UQ49 428 aa11.3□□□□□ -0.6
CHRNB1-202ENST00000536404 FAM25EA8MYX2 175 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 PAGE1O75459 146 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 JRKO75564 520 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 PRSS23O95084 383 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 FGF1P05230 155 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 SERPINF2P08697 491 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 SPINK2P20155 84 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 CSRP1P21291 193 aaKnown RBP11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 ENPP1P22413 925 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 HOXD9P28356 352 aaPredicted RBP11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 CD6P30203 668 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 SERPINB1P30740 379 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 RCVRNP35243 200 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 CHRNA4P43681 627 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 SERPINB10P48595 397 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 POLR2JP52435 117 aaKnown RBP11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 PGGT1BP53609 377 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 ARSFP54793 590 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 CDKN2DP55273 166 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 P2RX3P56373 397 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 ERVK-8P63133 956 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 RAD51Q06609 339 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 CDC20Q12834 499 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 FOXC1Q12948 553 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 IL18R1Q13478 541 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 CAPRIN1Q14444 709 aaKnown RBP11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 STARD3Q14849 445 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 PCSK7Q16549 785 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 RFX4Q33E94 735 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 FGD3Q5JSP0 725 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 ARHGAP36Q6ZRI8 547 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 TFAP2DQ7Z6R9 452 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 CCDC28AQ8IWP9 274 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 UMODL1-AS1Q8N2C9 162 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 NKAPQ8N5F7 415 aaKnown RBP11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 DPP10Q8N608 796 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 OR13J1Q8NGT2 312 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 BIRC7Q96CA5 298 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 ZNF419Q96HQ0 510 aaPredicted RBP11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 FCRL2Q96LA5 508 aaPredicted RBP11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 SERPINB11Q96P15 392 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 FANCEQ9HB96 536 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 ITM2CQ9NQX7 267 aa11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 WSB2Q9NYS7 404 aaPredicted RBP11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 OAS3Q9Y6K5 1087 aaKnown RBP11.29□□□□□ -0.6
CHRNB1-202ENST00000536404 E9PAM4 449 aa11.28□□□□□ -0.6
CHRNB1-202ENST00000536404 CDK2AP1O14519 115 aa11.28□□□□□ -0.6
CHRNB1-202ENST00000536404 NPC1O15118 1278 aa11.28□□□□□ -0.6
CHRNB1-202ENST00000536404 SYNCRIPO60506 623 aaKnown RBP11.28□□□□□ -0.6
CHRNB1-202ENST00000536404 EPOP01588 193 aa11.28□□□□□ -0.6
CHRNB1-202ENST00000536404 ANXA6P08133 673 aa11.28□□□□□ -0.6
CHRNB1-202ENST00000536404 CEACAM1P13688 526 aa11.28□□□□□ -0.6
CHRNB1-202ENST00000536404 HLA-EP13747 358 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms