RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 COQ8BQ96D53 544 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 SMARCD1Q96GM5 515 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 MSLNLQ96KJ4 702 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 FCRL1Q96LA6 429 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 TRNT1Q96Q11 434 aaKnown RBP6.73□□□□□ -1.33
CPSF7-215ENST00000536145 FYTTD1Q96QD9 318 aaKnown RBP6.73□□□□□ -1.33
CPSF7-215ENST00000536145 CHCHD6Q9BRQ6 235 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 TTYH2Q9BSA4 534 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 TRIM62Q9BVG3 475 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 TTLL2Q9BWV7 592 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 P2RY12Q9H244 342 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 MIXL1Q9H2W2 232 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 PDFQ9HBH1 243 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 RANGRFQ9HD47 186 aaPredicted RBP6.73□□□□□ -1.33
CPSF7-215ENST00000536145 DIABLOQ9NR28 239 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 RASSF1Q9NS23 344 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 KRT84Q9NSB2 600 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 OLA1Q9NTK5 396 aaKnown RBP6.73□□□□□ -1.33
CPSF7-215ENST00000536145 ERVK13-1Q9NX77 482 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 ELOVL2Q9NXB9 296 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 MIOSQ9NXC5 875 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 THUMPD1Q9NXG2 353 aaKnown RBP6.73□□□□□ -1.33
CPSF7-215ENST00000536145 B3GNT2Q9NY97 397 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 STMN3Q9NZ72 180 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 MPP6Q9NZW5 540 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 SPASTQ9UBP0 616 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 EIF3KQ9UBQ5 218 aaKnown RBP6.73□□□□□ -1.33
CPSF7-215ENST00000536145 TRPS1Q9UHF7 1281 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 PPT2Q9UMR5 302 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 GABRQQ9UN88 632 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 CFL2Q9Y281 166 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 LSM2Q9Y333 95 aaKnown RBP6.73□□□□□ -1.33
CPSF7-215ENST00000536145 TNPO3Q9Y5L0 923 aaKnown RBP6.73□□□□□ -1.33
CPSF7-215ENST00000536145 CFAP20Q9Y6A4 193 aaKnown RBP6.73□□□□□ -1.33
CPSF7-215ENST00000536145 LTBP3Q9NS15 1303 aa6.73□□□□□ -1.33
CPSF7-215ENST00000536145 IQCMA0A1B0GVH7 501 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 SMIM35A0A1B0GVV1 85 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 A0A1W2PQ09 198 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 MBLAC1A4D2B0 266 aaPredicted RBP6.72□□□□□ -1.33
CPSF7-215ENST00000536145 LINC00862A6NCI5 91 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 KRT87PA6NCN2 255 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 ZSCAN5BA6NJL1 495 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 DRGXA6NNA5 263 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 A8MVJ9 347 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 LEUTXA8MZ59 168 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 B8ZZF3 427 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 HAS3O00219 553 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 PLK4O00444 970 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 MANBAO00462 879 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 TNFRSF10BO14763 440 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 PLA2G10O15496 165 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 RGS14O43566 566 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 SCN2BO60939 215 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 NIPSNAP2O75323 286 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 VPS26AO75436 327 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 GJB3O75712 270 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 KCNK5O95279 499 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 OTCP00480 354 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 HLA-DQB1P01920 261 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 C1QBP02746 253 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 C1QCP02747 245 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 CNPP09543 421 aaKnown RBP6.72□□□□□ -1.33
CPSF7-215ENST00000536145 ZNF286BP0CG31 522 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 BCKDHAP12694 445 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 GPX2P18283 190 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 PRPH2P23942 346 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 ITGB7P26010 798 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 BMP8BP34820 402 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 PBX3P40426 434 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 HTR2BP41595 481 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 ALDH9A1P49189 494 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 CRYBA2P53672 197 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 WNT3P56703 355 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 OLR1P78380 273 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 CDC42EP1Q00587 391 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 FAPQ12884 760 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 MTAPQ13126 283 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 GTF2H2Q13888 395 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 PTGR1Q14914 329 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 PTPRNQ16849 979 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 VMACQ2NL98 169 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 ESCO2Q56NI9 601 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 HABP4Q5JVS0 413 aaKnown RBP6.72□□□□□ -1.33
CPSF7-215ENST00000536145 GNASQ5JWF2 1037 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 SPANXN2Q5MJ10 180 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 GTF2H2CQ6P1K8 395 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 ERICH5Q6P6B1 374 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 SBSNQ6UWP8 590 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 CD300LGQ6UXG3 332 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 GDPGP1Q6ZNW5 385 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 Q6ZPB1 254 aaPredicted RBP6.72□□□□□ -1.33
CPSF7-215ENST00000536145 SAMD7Q7Z3H4 446 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 BMP8AQ7Z5Y6 402 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 GRAMD2AQ8IUY3 354 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 CCDC28AQ8IWP9 274 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 TMEM132CQ8N3T6 1108 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 SYNPOQ8N3V7 929 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 SDR16C5Q8N3Y7 309 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 ESX1Q8N693 406 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 C1orf52Q8N6N3 182 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms