RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 KCNK5O95279 499 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 LDLRP01130 860 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 CYC1P08574 325 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 POLR2MP0CAP2 368 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 FGF3P11487 239 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-202ENST00000535689 ACADLP28330 430 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 TCF7P36402 384 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-202ENST00000535689 EIF2S3P41091 472 aaKnown RBP3.17□□□□□ -1.9
SNHG1-202ENST00000535689 CAPZA2P47755 286 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 NOVP48745 357 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 HSD17B4P51659 736 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 CRYBB1P53674 252 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-202ENST00000535689 SNAP25P60880 206 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 SNRPEP62304 92 aaKnown RBP3.17□□□□□ -1.9
SNHG1-202ENST00000535689 PITX1P78337 314 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-202ENST00000535689 ZNF155Q12901 538 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-202ENST00000535689 DLG1Q12959 904 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 CDC16Q13042 620 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 DHX34Q14147 1143 aaKnown RBP3.17□□□□□ -1.9
SNHG1-202ENST00000535689 MLF2Q15773 248 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-202ENST00000535689 FAM69BQ5VUD6 431 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 GARNL3Q5VVW2 1013 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 C18orf63Q68DL7 685 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 SPSB3Q6PJ21 355 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 RHBDF2Q6PJF5 856 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 CFAP77Q6ZQR2 320 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 MFSD6Q6ZSS7 791 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 PLPPR4Q7Z2D5 763 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 LONP2Q86WA8 852 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 MAP7D3Q8IWC1 876 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 PELI3Q8N2H9 469 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 GUF1Q8N442 669 aaKnown RBP3.17□□□□□ -1.9
SNHG1-202ENST00000535689 MINDY1Q8N5J2 469 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 KBTBD3Q8NAB2 608 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 POGLUT1Q8NBL1 392 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 SLC38A9Q8NBW4 561 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 NUDCD2Q8WVJ2 157 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 TMED6Q8WW62 240 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 FIG4Q92562 907 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 FRAT1Q92837 279 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-202ENST00000535689 EXOC4Q96A65 974 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 ZBTB9Q96C00 473 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 MSANTD3Q96H12 275 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 EPYCQ99645 322 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 EGFL8Q99944 293 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 LRRC1Q9BTT6 524 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 APOL6Q9BWW8 343 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 LRMDAQ9H2I8 198 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.17□□□□□ -1.9
SNHG1-202ENST00000535689 TAB2Q9NYJ8 693 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 RCC2Q9P258 522 aaKnown RBP3.17□□□□□ -1.9
SNHG1-202ENST00000535689 PADI1Q9ULC6 663 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 ZNF148Q9UQR1 794 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.17□□□□□ -1.9
SNHG1-202ENST00000535689 SDK1Q7Z5N4 2213 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 ZZEF1O43149 2961 aa3.17□□□□□ -1.9
SNHG1-202ENST00000535689 TDRD15B5MCY1 1934 aaKnown RBP3.17□□□□□ -1.9
SNHG1-202ENST00000535689 LAMA1P25391 3075 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 THADAQ6YHU6 1953 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 ASH1LQ9NR48 2969 aaKnown RBP3.16□□□□□ -1.9
SNHG1-202ENST00000535689 PDCD11Q14690 1871 aaKnown RBP3.16□□□□□ -1.9
SNHG1-202ENST00000535689 IGHV4OR15-8A0A075B7B6 117 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 A0A0G2JPF8 293 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 PLSCR5A0PG75 271 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 OR2A25A4D2G3 310 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 HNRNPCL3B7ZW38 293 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 ANHXE9PGG2 379 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 IKBKBO14920 756 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 MAGEB2O15479 319 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 SMAD6O43541 496 aaKnown RBP3.16□□□□□ -1.9
SNHG1-202ENST00000535689 PLOD3O60568 738 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 AKAP3O75969 853 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 KRT36O76013 467 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 RHOBTB1O94844 696 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 CLDN14O95500 239 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 PMS2P2O95744 297 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 FAM106CPP0CH98 169 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 HNRNPCL4P0DMR1 293 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 PDHBP11177 359 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 CSRP1P21291 193 aaKnown RBP3.16□□□□□ -1.9
SNHG1-202ENST00000535689 CBLP22681 906 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 HOXA6P31267 233 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 CCKARP32238 428 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 GARSP41250 739 aaKnown RBP3.16□□□□□ -1.9
SNHG1-202ENST00000535689 SLC9A3P48764 834 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 CLCN3P51790 818 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 CLCN4P51793 760 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 EEF1A2Q05639 463 aaKnown RBP3.16□□□□□ -1.9
SNHG1-202ENST00000535689 SLC20A2Q08357 652 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 NCBP1Q09161 790 aaKnown RBP3.16□□□□□ -1.9
SNHG1-202ENST00000535689 GTF2H2Q13888 395 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 KEAP1Q14145 624 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 ZNF234Q14588 700 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 SF3B4Q15427 424 aaKnown RBP eCLIP3.16□□□□□ -1.94e-47■■■■■ 46.5
SNHG1-202ENST00000535689 ALX1Q15699 326 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 EFNB3Q15768 340 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 IZUMO4Q1ZYL8 232 aa3.16□□□□□ -1.9
SNHG1-202ENST00000535689 EIF2S3LQ2VIR3 472 aaKnown RBP3.16□□□□□ -1.9
SNHG1-202ENST00000535689 FAM133BQ5BKY9 247 aaKnown RBP3.16□□□□□ -1.9
SNHG1-202ENST00000535689 C9orf152Q5JTZ5 239 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms