RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 HADHBP55084 474 aaKnown RBP17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 KLHL26Q53HC5 615 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 ZNF280BQ86YH2 543 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 C1orf52Q8N6N3 182 aaKnown RBP17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 OR4E2Q8NGC2 313 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 ADAD1Q96M93 576 aaKnown RBP17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 POLR2J2Q9GZM3 115 aaKnown RBP17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 METTL7AQ9H8H3 244 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 C14orf105Q9NVL8 296 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 FNIP2Q9P278 1114 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 TMEM131LA2VDJ0 1609 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 TEAD2Q15562 447 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 DECR1Q16698 335 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 FRG2Q64ET8 278 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 THOC6Q86W42 341 aaKnown RBP17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 TMEM17Q86X19 198 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 OR2L8Q8NGY9 312 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 FRG2BQ96QU4 278 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 FABP12A6NFH5 140 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 NCBP2-AS2Q69YL0 99 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 THOC7Q6I9Y2 204 aaKnown RBP17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 ENGP17813 658 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 ARSJQ5FYB0 599 aaPredicted RBP17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 PAMR1Q6UXH9 720 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 UBE2J2Q8N2K1 259 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 ANKRA2Q9H9E1 313 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 MUSKO15146 869 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 RPL10P27635 214 aaKnown RBP17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 SCNN1AP37088 669 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 C12orf40Q86WS4 652 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 TIMMDC1Q9NPL8 285 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 PIGVQ9NUD9 493 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 SLC22A14Q9Y267 594 aa17.72■□□□□ 0.43
SFSWAP-203ENST00000535236 A0A1W2PRQ8 180 aa17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 STATHP02808 62 aa17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 ACVRL1P37023 503 aa17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 USP43Q70EL4 1123 aa17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 NCSTNQ92542 709 aa17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 FAM129BQ96TA1 746 aa17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 FBXO9Q9UK97 447 aaPredicted RBP17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 SCML2Q9UQR0 700 aa17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 CLDN7O95471 211 aa17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 GSTM3P21266 225 aa17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 RFC2P35250 354 aa17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 KCNQ1P51787 676 aa17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 RPL19P84098 196 aaKnown RBP17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 GRASPQ7Z6J2 395 aaPredicted RBP17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 TFGQ92734 400 aaPredicted RBP17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 COMMD3Q9UBI1 195 aa17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 MALT1Q9UDY8 824 aa17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 HS3ST4Q9Y661 456 aa17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 CLIC1O00299 241 aa17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 TBX1O43435 398 aa17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 ORC5O43913 435 aa17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 CMTM8Q8IZV2 173 aa17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 CXorf21Q9HAI6 301 aa17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 SERTAD3Q9UJW9 196 aa17.71■□□□□ 0.43
SFSWAP-203ENST00000535236 B4GALT2O60909 372 aa17.71■□□□□ 0.42
SFSWAP-203ENST00000535236 TYRP14679 529 aa17.71■□□□□ 0.42
SFSWAP-203ENST00000535236 EDNRAP25101 427 aa17.71■□□□□ 0.42
SFSWAP-203ENST00000535236 PEX2P28328 305 aa17.71■□□□□ 0.42
SFSWAP-203ENST00000535236 RORCP51449 518 aa17.71■□□□□ 0.42
SFSWAP-203ENST00000535236 SLITRK4Q8IW52 837 aa17.71■□□□□ 0.42
SFSWAP-203ENST00000535236 KCNK6Q9Y257 313 aa17.71■□□□□ 0.42
SFSWAP-203ENST00000535236 SLC45A1Q9Y2W3 748 aa17.71■□□□□ 0.42
SFSWAP-203ENST00000535236 IGKV6D-41A0A0C4DH26 115 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 ZNF99A8MXY4 864 aaPredicted RBP17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 J3KR12 359 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 L7N2F9 121 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 AOC2O75106 756 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 BCHEP06276 602 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 CCND3P30281 292 aaPredicted RBP17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 CAPZA1P52907 286 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 VAMP2P63027 116 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 ZNF234Q14588 700 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 FIP1L1Q6UN15 594 aaKnown RBP17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 DEFB119Q8N690 84 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 GEMIN6Q8WXD5 167 aaKnown RBP17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 IRF7Q92985 503 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 NXPE2Q96DL1 559 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 EURLQ9NYK6 297 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 PMF1-BGLAPU3KQ54 211 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 PLIN4Q96Q06 1357 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 CSTBP04080 98 aaKnown RBP17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 FAM163BP0C2L3 166 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 OR12D2P58182 307 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 OR52E4Q8NGH9 312 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 OR5M3Q8NGP4 307 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 KLHL6Q8WZ60 621 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 TMEM125Q96AQ2 219 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 ETAA1Q9NY74 926 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 FETUBQ9UGM5 382 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 C5orf51A6NDU8 294 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 CDH1P12830 882 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 LGI4Q8N135 537 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 ZSCAN4Q8NAM6 433 aaPredicted RBP17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 NAT14Q8WUY8 206 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 DKKL1Q9UK85 242 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms