RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 ABATP80404 500 aa17.96■□□□□ 0.47
NDUFS3-213ENST00000534716 TAP2Q03519 686 aa17.96■□□□□ 0.47
NDUFS3-213ENST00000534716 CTBP1Q13363 440 aa17.96■□□□□ 0.47
NDUFS3-213ENST00000534716 SUSD1Q6UWL2 747 aa17.96■□□□□ 0.47
NDUFS3-213ENST00000534716 ZADH2Q8N4Q0 377 aa17.96■□□□□ 0.47
NDUFS3-213ENST00000534716 OR11G2Q8NGC1 345 aa17.96■□□□□ 0.47
NDUFS3-213ENST00000534716 ZNF480Q8WV37 535 aa17.96■□□□□ 0.47
NDUFS3-213ENST00000534716 INPP5DQ92835 1189 aa17.96■□□□□ 0.47
NDUFS3-213ENST00000534716 SNRNP40Q96DI7 357 aaKnown RBP17.96■□□□□ 0.47
NDUFS3-213ENST00000534716 C10orf90Q96M02 699 aa17.96■□□□□ 0.47
NDUFS3-213ENST00000534716 ACAT2Q9BWD1 397 aa17.96■□□□□ 0.47
NDUFS3-213ENST00000534716 SOX17Q9H6I2 414 aaPredicted RBP17.96■□□□□ 0.47
NDUFS3-213ENST00000534716 FBXO6Q9NRD1 293 aaPredicted RBP17.96■□□□□ 0.47
NDUFS3-213ENST00000534716 CUEDC1Q9NWM3 386 aaPredicted RBP17.96■□□□□ 0.47
NDUFS3-213ENST00000534716 UTP6Q9NYH9 597 aaKnown RBP17.96■□□□□ 0.47
NDUFS3-213ENST00000534716 LUZP4Q9P127 313 aa17.96■□□□□ 0.47
NDUFS3-213ENST00000534716 ZNF282Q9UDV7 671 aaPredicted RBP17.96■□□□□ 0.47
NDUFS3-213ENST00000534716 TSR3Q9UJK0 312 aaKnown RBP17.96■□□□□ 0.47
NDUFS3-213ENST00000534716 CDC14AQ9UNH5 594 aa17.96■□□□□ 0.47
NDUFS3-213ENST00000534716 ZGLP1P0C6A0 271 aa17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 ERVK-10P10266 1014 aa17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 EZRP15311 586 aaKnown RBP17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 ITGA3P26006 1051 aa17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 KLC1Q07866 573 aa17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 TUBB8Q3ZCM7 444 aa17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 GARNL3Q5VVW2 1013 aa17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 ICE2Q659A1 982 aa17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 PPIL6Q8IXY8 311 aa17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 LRRC56Q8IYG6 542 aaPredicted RBP17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 ARHGEF39Q8N4T4 335 aa17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 DTWD1Q8N5C7 304 aa17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 METTL27Q8N6F8 245 aaPredicted RBP17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 STT3BQ8TCJ2 826 aa17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 COG1Q8WTW3 980 aa17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 OR2A5Q96R48 311 aa17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 OSBPL9Q96SU4 736 aa17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 CCDC68Q9H2F9 335 aa17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 ZBTB20Q9HC78 741 aaPredicted RBP17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 C20orf96Q9NUD7 363 aaPredicted RBP17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 FBXO5Q9UKT4 447 aa17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 MAU2Q9Y6X3 613 aa17.95■□□□□ 0.46
NDUFS3-213ENST00000534716 PCM1Q15154 2024 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 A0A1W2PQ72 361 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 BLACEA4D250 179 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 ZBTB14O43829 449 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 EIF2S1P05198 315 aaKnown RBP17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 OCA2Q04671 838 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 DSG2Q14126 1118 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 RBBP7Q16576 425 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 RNASEH2BQ5TBB1 312 aaKnown RBP17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 AGAP7PQ5VUJ5 663 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 ATG9BQ674R7 924 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 SHISA6Q6ZSJ9 500 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 CD200R1Q8TD46 325 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 PPP4R1Q8TF05 950 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 MIEF2Q96C03 454 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 C19orf60Q96EN9 201 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 CABS1Q96KC9 395 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 AGAP4Q96P64 663 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 FAM167BQ9BTA0 163 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 CRB3Q9BUF7 120 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 LHPPQ9H008 270 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 ILKAPQ9H0C8 392 aaPredicted RBP17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 SYNPO2LQ9H987 977 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 TAC3Q9UHF0 121 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 PCDHGA10Q9Y5H3 936 aa17.94■□□□□ 0.46
NDUFS3-213ENST00000534716 SHANK1Q9Y566 2161 aa17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 GOLGA6L10A0A0M3HER8 536 aa17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 TXNDC9O14530 226 aa17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 PCDH17O14917 1159 aa17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 PRPF4O43172 522 aaKnown RBP eCLIP17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 HAUS5O94927 633 aa17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 AGFG2O95081 481 aa17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 CBX6O95503 412 aa17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 SLC26A3P40879 764 aa17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 CUL1Q13616 776 aa17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 CUZD1Q86UP6 607 aa17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 CSNK1A1LQ8N752 337 aa17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 SLCO2A1Q92959 643 aa17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 GPR21Q99679 349 aa17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 EBNA1BP2Q99848 306 aaKnown RBP17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 WDR77Q9BQA1 342 aaPredicted RBP17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 AARSD1Q9BTE6 412 aaKnown RBP17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 TGIF2Q9GZN2 237 aa17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 LRRC4CQ9HCJ2 640 aa17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 RUVBL1Q9Y265 456 aaKnown RBP17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 MAD1L1Q9Y6D9 718 aa17.93■□□□□ 0.46
NDUFS3-213ENST00000534716 RP1L1Q8IWN7 2480 aaPredicted RBP17.92■□□□□ 0.46
NDUFS3-213ENST00000534716 SMAPO00193 183 aa17.92■□□□□ 0.46
NDUFS3-213ENST00000534716 SEMA7AO75326 666 aa17.92■□□□□ 0.46
NDUFS3-213ENST00000534716 TTC4O95801 387 aa17.92■□□□□ 0.46
NDUFS3-213ENST00000534716 HPP00738 406 aa17.92■□□□□ 0.46
NDUFS3-213ENST00000534716 F7P08709 466 aaPredicted RBP17.92■□□□□ 0.46
NDUFS3-213ENST00000534716 FBLP22087 321 aaKnown RBP17.92■□□□□ 0.46
NDUFS3-213ENST00000534716 HRH2P25021 359 aa17.92■□□□□ 0.46
NDUFS3-213ENST00000534716 Q0VFX4 171 aa17.92■□□□□ 0.46
NDUFS3-213ENST00000534716 MRPL49Q13405 166 aaKnown RBP17.92■□□□□ 0.46
NDUFS3-213ENST00000534716 FAM53BQ14153 422 aa17.92■□□□□ 0.46
NDUFS3-213ENST00000534716 HSP90AA5PQ58FG0 334 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms