RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	DENND6A	Q8IWF6	608 aa		4.4	□□□□□ -1.71
ECHDC1-223	ENST00000534442	FAM217A	Q8IXS0	508 aa		4.4	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SLC35F3	Q8IY50	421 aa		4.4	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CIART	Q8N365	385 aa	Predicted RBP	4.4	□□□□□ -1.71
ECHDC1-223	ENST00000534442	METTL13	Q8N6R0	699 aa		4.4	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ROBO4	Q8WZ75	1007 aa		4.4	□□□□□ -1.71
ECHDC1-223	ENST00000534442	JAKMIP2	Q96AA8	810 aa		4.4	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SLC22A18	Q96BI1	424 aa		4.4	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SNRNP40	Q96DI7	357 aa	Known RBP	4.4	□□□□□ -1.71
ECHDC1-223	ENST00000534442	OR2A14	Q96R47	310 aa		4.4	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MAP6D1	Q9H9H5	199 aa		4.4	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ANKRD10	Q9NXR5	420 aa		4.4	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MSRB1	Q9NZV6	116 aa		4.4	□□□□□ -1.71
ECHDC1-223	ENST00000534442	GIMAP2	Q9UG22	337 aa		4.4	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PISD	Q9UG56	409 aa		4.4	□□□□□ -1.71
ECHDC1-223	ENST00000534442	NENF	Q9UMX5	172 aa		4.4	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CEPT1	Q9Y6K0	416 aa		4.4	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SLC4A4	Q9Y6R1	1079 aa		4.4	□□□□□ -1.71
ECHDC1-223	ENST00000534442	KIAA1109	Q2LD37	5005 aa		4.4	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PTPRC	P08575	1304 aa		4.4	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ARL5C	A6NH57	179 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ZNF814	B7Z6K7	855 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SDC3	O75056	442 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CNOT3	O75175	753 aa	Known RBP	4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PRDM1	O75626	825 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SLC25A12	O75746	678 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	EPHB2	P29323	1055 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ARHGAP25	P42331	645 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	GDF5	P43026	501 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	HSD17B4	P51659	736 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PMS2	P54278	862 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ARPP19	P56211	112 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	BFSP1	Q12934	665 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	LAMB3	Q13751	1172 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CDON	Q4KMG0	1287 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ATP1A1-AS1	Q5TC04	95 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SLC30A6	Q6NXT4	461 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	RBFA	Q8N0V3	343 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PARP16	Q8N5Y8	322 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	POC5	Q8NA72	575 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	HJURP	Q8NCD3	748 aa	Predicted RBP	4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	HUS1B	Q8NHY5	278 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	FBXL8	Q96CD0	374 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ELMOD3	Q96FG2	381 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	INPP4A	Q96PE3	977 aa	Predicted RBP	4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MSTO1	Q9BUK6	570 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	KLHL31	Q9H511	634 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TASP1	Q9H6P5	420 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	AZI2	Q9H6S1	392 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	BPIFA1	Q9NP55	256 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	DUS2	Q9NX74	493 aa	Known RBP	4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MIOS	Q9NXC5	875 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	STX8	Q9UNK0	236 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CNTRL	Q7Z7A1	2325 aa		4.39	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TDRD15	B5MCY1	1934 aa	Known RBP	4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MYO18A	Q92614	2054 aa	Known RBP	4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	OR2A25	A4D2G3	310 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MTMR11	A4FU01	709 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TLCD2	A6NGC4	264 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442		A8MV72	311 aa	Predicted RBP	4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	STMND1	H3BQB6	276 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CYR61	O00622	381 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CTDSP2	O14595	271 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	NDUFS3	O75489	264 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	C22orf31	O95567	290 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	FSHB	P01225	129 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SLPI	P03973	132 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	APOD	P05090	189 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MMP2	P08253	660 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MYZAP	P0CAP1	466 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ENO3	P13929	434 aa	Predicted RBP	4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ZNF182	P17025	639 aa	Predicted RBP	4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CERS1	P27544	350 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	GABRR2	P28476	465 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	HOXA13	P31271	388 aa	Predicted RBP	4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SPAM1	P38567	509 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TNFRSF4	P43489	277 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PPP3CC	P48454	512 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	IFNAR2	P48551	515 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CAMP	P49913	170 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	GALC	P54803	685 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ID2	Q02363	134 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	GAD2	Q05329	585 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	KDSR	Q06136	332 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	FAM27E3	Q08E93	113 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442		Q0VFX4	171 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	LRMP	Q12912	555 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MTX1	Q13505	466 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MTF1	Q14872	753 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	C2orf68	Q2NKX9	166 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	FAM133B	Q5BKY9	247 aa	Known RBP	4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	BMP2KL	Q5H9B9	411 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	GARNL3	Q5VVW2	1013 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	NCAPH2	Q6IBW4	605 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	STOX1	Q6ZVD7	989 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TRIL	Q7L0X0	811 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	RD3	Q7Z3Z2	195 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TRMT11	Q7Z4G4	463 aa	Known RBP	4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	KRT77	Q7Z794	578 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MRPL10	Q7Z7H8	261 aa	Known RBP	4.38	□□□□□ -1.71

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