RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 EMP3P54852 163 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 AP2B1P63010 937 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 CDC16Q13042 620 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 CUL1Q13616 776 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 PTK6Q13882 451 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 GRB7Q14451 532 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 ZNF169Q14929 603 aaPredicted RBP8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 MUM1Q2TAK8 710 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 WASHC2DQ5SRD0 308 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 DUPD1Q68J44 220 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 RPUSD3Q6P087 351 aaKnown RBP8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 KIRREL2Q6UWL6 708 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 ZNF534Q76KX8 674 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 SDCCAG8Q86SQ7 713 aaPredicted RBP8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 PRUNE1Q86TP1 453 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 KCNMB4Q86W47 210 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 VRK3Q8IV63 474 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 FAM20CQ8IXL6 584 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 C2orf73Q8N5S3 287 aaPredicted RBP8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 OR11G2Q8NGC1 345 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 SKA2Q8WVK7 121 aaPredicted RBP8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 FAR1Q8WVX9 515 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 ANKRD7Q92527 254 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 INPP5DQ92835 1189 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 MVB12AQ96EY5 273 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 TCF12Q99081 682 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 CRB3Q9BUF7 120 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 IL22Q9GZX6 179 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 ZBTB20Q9HC78 741 aaPredicted RBP8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 ZNF304Q9HCX3 659 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 EIF2B3Q9NR50 452 aaKnown RBP8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 UTP6Q9NYH9 597 aaKnown RBP8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 ZNF282Q9UDV7 671 aaPredicted RBP8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 SLC2A6Q9UGQ3 507 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 NOVA2Q9UNW9 492 aaKnown RBP8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 KLHL20Q9Y2M5 609 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 ABCA12Q86UK0 2595 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 LRBAP50851 2863 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 GTF3C1Q12789 2109 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 A0A1B0GUH1 482 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 DYTNA2CJ06 578 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 IQCF5A8MTL0 148 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 TXNDC9O14530 226 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 MAP2K7O14733 419 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 VPS26AO75436 327 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 USP1O94782 785 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 C1orf105O95561 183 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 CLDN1O95832 211 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 HPP00738 406 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 ZSCAN5DPP0CG00 497 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 MYBL2P10244 700 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 ERVK-10P10266 1014 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 PKMP14618 531 aaKnown RBP8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 ACPPP15309 386 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 RPS3P23396 243 aaKnown RBP eCLIP8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 CXCR2P25025 360 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 CMPK1P30085 196 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 HSD17B2P37059 387 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 DCTP40126 519 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 RPL21P46778 160 aaKnown RBP8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 OR1D4P47884 311 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 PLTPP55058 493 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 VSX2P58304 361 aaPredicted RBP8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 CDK16Q00536 496 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 GPS1Q13098 491 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 CALCOCO2Q13137 446 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 MFAP5Q13361 173 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 SEMA3AQ14563 771 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 HIF1AQ16665 826 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 RNF187Q5TA31 235 aaPredicted RBP8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 ARMC3Q5W041 872 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 MRNIPQ6NTE8 343 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 FAM180AQ6UWF9 173 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 MICALCLQ6ZW33 695 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 COX15Q7KZN9 410 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 TAX1BP1Q86VP1 789 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 PARP9Q8IXQ6 854 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 KBTBD2Q8IY47 623 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 GSPT2Q8IYD1 628 aaKnown RBP8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 BCORP1Q8N888 145 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 OR2L3Q8NG85 312 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 OR2A1Q8NGT9 310 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 STT3BQ8TCJ2 826 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 GRHL3Q8TE85 626 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 MIEF2Q96C03 454 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 SNF8Q96H20 258 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 THOC3Q96J01 351 aaKnown RBP8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 ZNF778Q96MU6 729 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 IL17FQ96PD4 163 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 P2RY12Q9H244 342 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 SOX17Q9H6I2 414 aaPredicted RBP8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 RUBCNLQ9H714 662 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 CHRAC1Q9NRG0 131 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 BFARQ9NZS9 450 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 SPATA7Q9P0W8 599 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 ZC3H7BQ9UGR2 993 aaKnown RBP8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 VPS9D1Q9Y2B5 631 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 NTNG1Q9Y2I2 539 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 SCN3AQ9NY46 2000 aa8.02□□□□□ -1.13
RPUSD4-209ENST00000534393 IGLV3-12A0A075B6K2 115 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms