RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 SLC41A2Q96JW4 573 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 ZNF641Q96N77 438 aaPredicted RBP2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 FOXC2Q99958 501 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 WDR77Q9BQA1 342 aaPredicted RBP2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 SOX7Q9BT81 388 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 RIOK2Q9BVS4 552 aaKnown RBP2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 NLNQ9BYT8 704 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 SPRTNQ9H040 489 aaPredicted RBP2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 ENKD1Q9H0I2 346 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 MAGEH1Q9H213 219 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 CXXC4Q9H2H0 198 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 CUEDC2Q9H467 287 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 UBE2TQ9NPD8 197 aaPredicted RBP2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 TMEM248Q9NWD8 314 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 ASNSD1Q9NWL6 643 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 SYBUQ9NX95 663 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 HPCAL4Q9UM19 191 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 G3BP2Q9UN86 482 aaKnown RBP2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 NEU3Q9UQ49 428 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 CNTN6Q9UQ52 1028 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 MTMR6Q9Y217 621 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 DNAJC16Q9Y2G8 782 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 WDR37Q9Y2I8 494 aa2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 PTRH2Q9Y3E5 179 aaKnown RBP2.87□□□□□ -1.95
CHMP4A-208ENST00000534106 ZGRF1Q86YA3 2104 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 KMT2CQ8NEZ4 4911 aaKnown RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 HRNRQ86YZ3 2850 aaPredicted RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 NPIPB15A6NHN6 443 aaPredicted RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 LILRA5A6NI73 299 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 SLC9B1P1A6NJY1 282 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 KRTAP29-1A8MX34 341 aaPredicted RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 INAFM1C9JVW0 142 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 FOXN3O00409 490 aaPredicted RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 ADAM10O14672 748 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 TOX3O15405 576 aaPredicted RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 HCRTR1O43613 425 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 NRP2O60462 931 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 STX10O60499 249 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 CLDN7O95471 211 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 ESRRBO95718 433 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 VIPP01282 170 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 IGLV2-14P01704 120 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 ALPPP05187 535 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 KLK3P07288 261 aaPredicted RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 UMODP07911 640 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 CELA2AP08217 269 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 PDHA1P08559 390 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 RAB40ALP0C0E4 278 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 EPB41P11171 864 aaKnown RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 F3P13726 295 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 ZNF8P17098 575 aaPredicted RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 XRCC1P18887 633 aaPredicted RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 TBXAS1P24557 533 aaPredicted RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 CD40P25942 277 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 ADSLP30566 484 aaPredicted RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 LSP1P33241 339 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 PAPOLAP51003 745 aaKnown RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 EPHB1P54762 984 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 STX17P56962 302 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 TUBB4BP68371 445 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 TMPRSS15P98073 1019 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 HSF1Q00613 529 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 BCL2L1Q07817 233 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 ITKQ08881 620 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 MGAT5Q09328 741 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 TRAF2Q12933 501 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 TUBB2AQ13885 445 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 NCF4Q15080 339 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 NFIL3Q16649 462 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 CDO1Q16878 200 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 SLC25A52Q3SY17 297 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 CCDC14Q49A88 953 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 PDCD4Q53EL6 469 aaKnown RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 ZNF789Q5FWF6 425 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 AGAP9Q5VTM2 703 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 RESP18Q5W5W9 173 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 XKRXQ6PP77 449 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 FAM180AQ6UWF9 173 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 SHISA6Q6ZSJ9 500 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 ESPNLQ6ZVH7 1005 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 BNIPLQ7Z465 357 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 C11orf96Q7Z7L8 435 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 BIVMQ86UB2 503 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 DNAAF5Q86Y56 855 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 SYTL1Q8IYJ3 562 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 CEP57L1Q8IYX8 460 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 PGBD5Q8N414 524 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 BCORP1Q8N888 145 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 CLEC1AQ8NC01 280 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 ACBD4Q8NC06 268 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 CHDHQ8NE62 594 aaPredicted RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 JOSD2Q8TAC2 188 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 GPT2Q8TD30 523 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 NAT14Q8WUY8 206 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 ASB10Q8WXI3 467 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 ANP32BQ92688 251 aaKnown RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 AP2M1Q96CW1 435 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 ECHDC3Q96DC8 303 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 TBC1D31Q96DN5 1066 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms