RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-215ENST00000533657 COPG2Q9UBF2 871 aa9.98□□□□□ -0.81
CAPRIN1-215ENST00000533657 RSL24D1Q9UHA3 163 aaKnown RBP9.98□□□□□ -0.81
CAPRIN1-215ENST00000533657 SNX11Q9Y5W9 270 aa9.98□□□□□ -0.81
CAPRIN1-215ENST00000533657 CDC7O00311 574 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 AQP9O43315 295 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 PCDHGA12O60330 932 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 BPGMP07738 259 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 MTHFD2P13995 350 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 CTSEP14091 401 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 PRKACBP22694 351 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 PBLDP30039 288 aaPredicted RBP9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 MPLP40238 635 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 ARRB1P49407 418 aaPredicted RBP9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 ALDH18A1P54886 795 aaKnown RBP9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 PCDH1Q08174 1060 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 PCLAFQ15004 111 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 TSNQ15631 228 aaKnown RBP9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 RPE65Q16518 533 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 SULT1C3Q6IMI6 304 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 UBE2R2Q712K3 238 aaPredicted RBP9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 GPSM1Q86YR5 675 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 LILRA3Q8N6C8 439 aaPredicted RBP9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 METTL25Q8N6Q8 603 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 ATL1Q8WXF7 558 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 PIGKQ92643 395 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 MED30Q96HR3 178 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 CCDC138Q96M89 665 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 TRIM54Q9BYV2 358 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 TRIM55Q9BYV6 548 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 TRIT1Q9H3H1 467 aaKnown RBP9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 OXSMQ9NWU1 459 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 SLC17A7Q9P2U7 560 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 ADAMTS6Q9UKP5 1117 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 RNF112Q9ULX5 631 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 PDE10AQ9Y233 779 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 RBMX2Q9Y388 322 aaKnown RBP9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 PRKAB1Q9Y478 270 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 ZNF839A8K0R7 811 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 ARHGEF33A8MVX0 844 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 PROB1E7EW31 1015 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 ARHGAP33O14559 1287 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 STT3AP46977 705 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 PGGT1BP53609 377 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 NR1H2P55055 460 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 WDR4P57081 412 aaKnown RBP9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 IRX4P78413 519 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 PCBP2Q15366 365 aaKnown RBP eCLIP9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 PHKG1Q16816 387 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 IYDQ6PHW0 289 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 MCOLN3Q8TDD5 553 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 FAM111AQ96PZ2 611 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 MENTQ9BUN1 341 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 TCEAL2Q9H3H9 227 aaPredicted RBP9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 ALG9Q9H6U8 611 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 ZNF358Q9NW07 568 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 FKBP14Q9NWM8 211 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 NLGN3Q9NZ94 848 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 TBC1D29Q9UFV1 150 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 KCNK6Q9Y257 313 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 PLEKHM1Q9Y4G2 1056 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 SCAMP1O15126 338 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 TNFAIP8O95379 198 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 TOP3BO95985 862 aaKnown RBP9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 MYL2P10916 166 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 CDH2P19022 906 aaPredicted RBP9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 ACTR1BP42025 376 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 FASLGP48023 281 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 ACTR1AP61163 376 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 GALNT1Q10472 559 aaPredicted RBP9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 GRB7Q14451 532 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 CYP2A13Q16696 494 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 TMTC4Q5T4D3 741 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 SIGIRRQ6IA17 410 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 DBX2Q6ZNG2 339 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 PRR23BQ6ZRT6 265 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 CENPSQ8N2Z9 138 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 SFRP1Q8N474 314 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 ICA1LQ8NDH6 482 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 TFGQ92734 400 aaPredicted RBP9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 DLG3Q92796 817 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 RAD51AP1Q96B01 352 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 BTBD9Q96Q07 612 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 CTRCQ99895 268 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 NUSAP1Q9BXS6 441 aaKnown RBP9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 NCKIPSDQ9NZQ3 722 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 KLHL3Q9UH77 587 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 MOSPD1Q9UJG1 213 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 PTBP2Q9UKA9 531 aaKnown RBP9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 TNPO3Q9Y5L0 923 aaKnown RBP9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 COLEC10Q9Y6Z7 277 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 ABCA7Q8IZY2 2146 aa9.97□□□□□ -0.81
CAPRIN1-215ENST00000533657 LOC105371267A0A1B0GV96 52 aa9.96□□□□□ -0.81
CAPRIN1-215ENST00000533657 FFAR2O15552 330 aa9.96□□□□□ -0.81
CAPRIN1-215ENST00000533657 CHEK2O96017 543 aa9.96□□□□□ -0.81
CAPRIN1-215ENST00000533657 TFPTP0C1Z6 253 aa9.96□□□□□ -0.81
CAPRIN1-215ENST00000533657 ZNF806P0C7X5 589 aa9.96□□□□□ -0.81
CAPRIN1-215ENST00000533657 ATP6V1B1P15313 513 aa9.96□□□□□ -0.81
CAPRIN1-215ENST00000533657 SLC6A12P48065 614 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms