RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 OCIAD1Q9NX40 245 aa12.25□□□□□ -0.45
RPUSD4-208ENST00000533628 TAC3Q9UHF0 121 aa12.25□□□□□ -0.45
RPUSD4-208ENST00000533628 EMCNQ9ULC0 261 aa12.25□□□□□ -0.45
RPUSD4-208ENST00000533628 SH2B3Q9UQQ2 575 aa12.25□□□□□ -0.45
RPUSD4-208ENST00000533628 PCM1Q15154 2024 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 NCF1BA6NI72 391 aaPredicted RBP12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 NCF1CA8MVU1 366 aaPredicted RBP12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 ZBTB11O95625 1053 aaPredicted RBP12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 FGF3P11487 239 aaPredicted RBP12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 CCL4P13236 92 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 NCF1P14598 390 aaPredicted RBP12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 NPPBP16860 134 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 KRT4P19013 534 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 RPA3P35244 121 aaPredicted RBP12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 GRIA3P42263 894 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 GABRA4P48169 554 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 SEPHS1P49903 392 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 PRDX1Q06830 199 aaKnown RBP12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 EIF3IQ13347 325 aaKnown RBP12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 SF1Q15637 639 aaKnown RBP12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 FCRL6Q6DN72 434 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 C16orf46Q6P387 395 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 LCTLQ6UWM7 567 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 RAB11FIP2Q7L804 512 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 APLFQ8IW19 511 aaPredicted RBP12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 AGBL5Q8NDL9 886 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 ZNF570Q96NI8 536 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 MIPEPQ99797 713 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 EGFL8Q99944 293 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 MRPL57Q9BQC6 102 aaKnown RBP12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 KLHL25Q9H0H3 589 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 FAM60AQ9NP50 221 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 SLC6A20Q9NP91 592 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 CCDC177Q9NQR7 707 aaPredicted RBP12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 MKS1Q9NXB0 559 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 CD274Q9NZQ7 290 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 XPR1Q9UBH6 696 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 DCDC2Q9UHG0 476 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 KLHL20Q9Y2M5 609 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 MSRB2Q9Y3D2 182 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 LOXL2Q9Y4K0 774 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 ASB1Q9Y576 335 aa12.24□□□□□ -0.45
RPUSD4-208ENST00000533628 LINGO3P0C6S8 592 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 HGFP14210 728 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 MAGP20916 626 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 CCND1P24385 295 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 CRHR1P34998 444 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 ETV5P41161 510 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 SH3BP2P78314 561 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 HSD11B2P80365 405 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 PRAMEF13Q5VWM6 474 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 ZNF425Q6IV72 752 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 CAPN13Q6MZZ7 669 aaPredicted RBP12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 C4orf33Q8N1A6 199 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 TCAIMQ8N3R3 496 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 C19orf47Q8N9M1 422 aaKnown RBP12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 BANPQ8N9N5 519 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 B4GALNT2Q8NHY0 566 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 WDR36Q8NI36 951 aaKnown RBP12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 UBTD2Q8WUN7 234 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 ESAMQ96AP7 390 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 PGM2Q96G03 612 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 CMKLR1Q99788 373 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 ACAT2Q9BWD1 397 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 YIPF3Q9GZM5 350 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 MRPL46Q9H2W6 279 aaKnown RBP12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 SATB2Q9UPW6 733 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 PCDHGA8Q9Y5G5 932 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 KNTC1P50748 2209 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 SPTBN2O15020 2390 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 PABPN1LA6NDY0 278 aaKnown RBP12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 SYCE1LA8MT33 242 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 B4E171 279 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 SUPT3HB4E1H0 165 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 TK2O00142 265 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 AGRPO00253 132 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 NRP2O60462 931 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 SUPT3HO75486 399 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 ANP32DO95626 131 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 FOLR1P15328 257 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 CREB1P16220 341 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 CSTF2P33240 577 aaKnown RBP eCLIP12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 TSPAN7P41732 249 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 GDF5P43026 501 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 SEC24CP53992 1094 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 ABATP80404 500 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 MC2RQ01718 297 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 RTP5Q14D33 572 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 FBXO48Q5FWF7 155 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 FIGLAQ6QHK4 219 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 FBXO39Q8N4B4 442 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 DNAJC22Q8N4W6 341 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 EXT2Q93063 718 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 MED8Q96G25 268 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 SCYL1Q96KG9 808 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 NRSN2Q9GZP1 204 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 PCBD2Q9H0N5 130 aa12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 PAPOLBQ9NRJ5 636 aaKnown RBP12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 NOP53Q9NZM5 478 aaKnown RBP12.23□□□□□ -0.45
RPUSD4-208ENST00000533628 OR2A25A4D2G3 310 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms