RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 CXorf40BQ96DE9 158 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 SLC45A3Q96JT2 553 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 CAMK1GQ96NX5 476 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 MMADHCQ9H3L0 296 aaPredicted RBP17.87■□□□□ 0.45
SMPD1-208ENST00000533123 SLC32A1Q9H598 525 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 CAPN10Q9HC96 672 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 RNF11Q9Y3C5 154 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 COLEC10Q9Y6Z7 277 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 LBPP18428 481 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 SLC6A12P48065 614 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 HERC3Q15034 1050 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 HLA-BQ31612 363 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 IL27RAQ6UWB1 636 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 MYLK4Q86YV6 388 aaPredicted RBP17.87■□□□□ 0.45
SMPD1-208ENST00000533123 SYTL1Q8IYJ3 562 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 DEFB107AQ8IZN7 70 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 TCAIMQ8N3R3 496 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 C2orf73Q8N5S3 287 aaPredicted RBP17.87■□□□□ 0.45
SMPD1-208ENST00000533123 WDR60Q8WVS4 1066 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 MVB12BQ9H7P6 319 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 HEBP2Q9Y5Z4 205 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 LMO7DNF2Z398 122 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 ENTPD5O75356 428 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 PRR35P0CG20 571 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 DPP6P42658 865 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 CDC16Q13042 620 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 NAE1Q13564 534 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 ABRAXAS2Q15018 415 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 METTL2BQ6P1Q9 378 aaKnown RBP17.86■□□□□ 0.45
SMPD1-208ENST00000533123 RABEPKQ7Z6M1 372 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 SCUBE1Q8IWY4 988 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 SLC25A45Q8N413 288 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 SLC37A2Q8TED4 501 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 MED8Q96G25 268 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 NPAS2Q99743 824 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 MENTQ9BUN1 341 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 IL21RQ9HBE5 538 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 FARSBQ9NSD9 589 aaKnown RBP17.86■□□□□ 0.45
SMPD1-208ENST00000533123 NOP53Q9NZM5 478 aaKnown RBP17.86■□□□□ 0.45
SMPD1-208ENST00000533123 RAB23Q9ULC3 237 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 SLC6A14Q9UN76 642 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 A0A088AWK7 358 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 GPX3P22352 226 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 PAX7P23759 505 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 HMOX2P30519 316 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 MPLP40238 635 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 RXRGP48443 463 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 DIO3P55073 304 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 SLC23A3Q6PIS1 610 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 Q6ZSR9 355 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 LRRC70Q7Z2Q7 622 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 TRIM48Q8IWZ4 208 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 SFRP1Q8N474 314 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 EFCAB3Q8N7B9 438 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 OR52E1Q8NGJ3 308 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 ATL1Q8WXF7 558 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 JPH3Q8WXH2 748 aaPredicted RBP17.86■□□□□ 0.45
SMPD1-208ENST00000533123 C1orf50Q9BV19 199 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 XKR8Q9H6D3 395 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 INTS7Q9NVH2 962 aaKnown RBP17.86■□□□□ 0.45
SMPD1-208ENST00000533123 CPNE7Q9UBL6 633 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 SLC22A14Q9Y267 594 aa17.86■□□□□ 0.45
SMPD1-208ENST00000533123 ARID1BQ8NFD5 2236 aaPredicted RBP17.85■□□□□ 0.45
SMPD1-208ENST00000533123 C9JVG2 144 aa17.85■□□□□ 0.45
SMPD1-208ENST00000533123 VPS4BO75351 444 aa17.85■□□□□ 0.45
SMPD1-208ENST00000533123 SORBS2O94875 1100 aaKnown RBP17.85■□□□□ 0.45
SMPD1-208ENST00000533123 EPN2O95208 641 aa17.85■□□□□ 0.45
SMPD1-208ENST00000533123 ANXA6P08133 673 aa17.85■□□□□ 0.45
SMPD1-208ENST00000533123 CCND1P24385 295 aa17.85■□□□□ 0.45
SMPD1-208ENST00000533123 TSTA3Q13630 321 aaPredicted RBP17.85■□□□□ 0.45
SMPD1-208ENST00000533123 KPNB1Q14974 876 aaKnown RBP17.85■□□□□ 0.45
SMPD1-208ENST00000533123 ARHGAP24Q8N264 748 aa17.85■□□□□ 0.45
SMPD1-208ENST00000533123 OR2I1PQ8NGU4 316 aa17.85■□□□□ 0.45
SMPD1-208ENST00000533123 LOXL4Q96JB6 756 aa17.85■□□□□ 0.45
SMPD1-208ENST00000533123 NTMT1Q9BV86 223 aa17.85■□□□□ 0.45
SMPD1-208ENST00000533123 GAREM1Q9H706 876 aa17.85■□□□□ 0.45
SMPD1-208ENST00000533123 SLC7A8Q9UHI5 535 aa17.85■□□□□ 0.45
SMPD1-208ENST00000533123 SPEGQ15772 3267 aa17.85■□□□□ 0.45
SMPD1-208ENST00000533123 KIR2DS5A0A0G2JLQ3 304 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 A0A0G2JNG1 304 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 OR5K4A6NMS3 321 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 E7ENX8 843 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 KIR2DS3K7RE56 304 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 PDE5AO76074 875 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 VIPP01282 170 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 EBLN1P0CF75 366 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 XRCC1P18887 633 aaPredicted RBP17.84■□□□□ 0.45
SMPD1-208ENST00000533123 RAP1GDS1P52306 607 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 PNLIPRP1P54315 467 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 STX1BP61266 288 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 TAP2Q03519 686 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 KIR2DS5Q14953 304 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 ZNF423Q2M1K9 1284 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 SUSD1Q6UWL2 747 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 FUNDC1Q8IVP5 155 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 ACTR8Q9H981 624 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 A0A1B0GTQ1 180 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 NDUFS1P28331 727 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 ATP4BP51164 291 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 TCF15Q12870 199 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms