RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 GNAZP19086 355 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 ITIH1P19827 911 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 ATP5F1P24539 256 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 GRK3P35626 688 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 AGTR2P50052 363 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 CCR8P51685 355 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 MAPK10P53779 464 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 RAB15P59190 212 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 YBX1P67809 324 aaKnown RBP10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 SH3BP2P78314 561 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 GABREP78334 506 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 SHC2P98077 582 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 CDC16Q13042 620 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 CAMK2BQ13554 666 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 IL11RAQ14626 422 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 KCNAB1Q14722 419 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 SETDB1Q15047 1291 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 ZIC1Q15915 447 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 FBXO48Q5FWF7 155 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 TNFAIP8L3Q5GJ75 292 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 ZC3H12BQ5HYM0 836 aaKnown RBP10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 DCAF12Q5T6F0 453 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 FCRL6Q6DN72 434 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 METTL2BQ6P1Q9 378 aaKnown RBP10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 EXOC3L1Q86VI1 746 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 SNX31Q8N9S9 440 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 CCDC63Q8NA47 563 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 SLC5A11Q8WWX8 675 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 PHF21BQ96EK2 531 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 APOPT1Q96IL0 206 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 PRAP1Q96NZ9 151 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 PLCD4Q9BRC7 762 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 TMEM79Q9BSE2 394 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 ASPSCR1Q9BZE9 553 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 FANCEQ9HB96 536 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 TMBIM4Q9HC24 238 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 FAM60AQ9NP50 221 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 SLC6A20Q9NP91 592 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 FGF21Q9NSA1 209 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 DNAJC11Q9NVH1 559 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 MKS1Q9NXB0 559 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 GPRC5BQ9NZH0 403 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 OPTCQ9UBM4 332 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 PISDQ9UG56 409 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 SERTAD3Q9UJW9 196 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 ANGPTL2Q9UKU9 493 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 PLCL2Q9UPR0 1127 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 PLLPQ9Y342 182 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 ANGPTL3Q9Y5C1 460 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 ACTL7BQ9Y614 415 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 IGKV1-8A0A0C4DH67 115 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 A0A1W2PNU3 283 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 OR2A25A4D2G3 310 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 AGPSO00116 658 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 CLGNO14967 610 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 PLIN3O60664 434 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 SASH3O75995 380 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 PROCP04070 461 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 SBK3P0C264 359 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 MSL3P1P0C860 447 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 MYL2P10916 166 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 CPA3P15088 417 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 EPB42P16452 691 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 RELAQ04206 551 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 TUBB3Q13509 450 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 RTP5Q14D33 572 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 PCBP2Q15366 365 aaKnown RBP eCLIP10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 PDK4Q16654 411 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 ZNF425Q6IV72 752 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 FBXO42Q6P3S6 717 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 NXPE4Q6UWF7 544 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 CEACAM20Q6UY09 585 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 LRRC70Q7Z2Q7 622 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 SLC22A9Q8IVM8 553 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 MCATQ8IVS2 390 aaKnown RBP10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 DNAJC22Q8N4W6 341 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 TBC1D19Q8N5T2 526 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 BMPERQ8N8U9 685 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 ABHD11Q8NFV4 315 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 OR8K5Q8NH50 307 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 RDH11Q8TC12 318 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 UBTD2Q8WUN7 234 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 USP7Q93009 1102 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 NEIL2Q969S2 332 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 NXPE2Q96DL1 559 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 CCDC126Q96EE4 140 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 SLC46A1Q96NT5 459 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 TEFMQ96QE5 360 aaKnown RBP10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 ZPBPQ9BS86 351 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 SSU72Q9NP77 194 aaKnown RBP10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 CUEDC1Q9NWM3 386 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 SIDT1Q9NXL6 827 aaKnown RBP10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 MID2Q9UJV3 735 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 RARRES3Q9UL19 164 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 EMCNQ9ULC0 261 aa10.79□□□□□ -0.68
TRAPPC4-211ENST00000533012 A0A0J9YVX5 310 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 MED19A0JLT2 244 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 A8MT66 165 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 DLX3O60479 287 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 SRPX2O60687 465 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms