RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 KATNA1O75449 491 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 LYPLA1O75608 230 aaPredicted RBP13.78□□□□□ -0.2
COL16A1-217ENST00000532877 MLYCDO95822 493 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 CHRNGP07510 517 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 PPM1FP49593 454 aaPredicted RBP13.78□□□□□ -0.2
COL16A1-217ENST00000532877 ABCE1P61221 599 aaKnown RBP13.78□□□□□ -0.2
COL16A1-217ENST00000532877 YBX1P67809 324 aaKnown RBP13.78□□□□□ -0.2
COL16A1-217ENST00000532877 TRAF3Q13114 568 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 STX3Q13277 289 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 AMZ1Q400G9 498 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 ARL13AQ5H913 290 aaPredicted RBP13.78□□□□□ -0.2
COL16A1-217ENST00000532877 NKAIN2Q5VXU1 208 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 ICE2Q659A1 982 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 ARMC6Q6NXE6 501 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 SPESP1Q6UW49 350 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 ATG14Q6ZNE5 492 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 RGS9BPQ6ZS82 235 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 MTERF4Q7Z6M4 381 aaKnown RBP13.78□□□□□ -0.2
COL16A1-217ENST00000532877 TRIM73Q86UV7 250 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 LSMEM2Q8N112 164 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 OR2L3Q8NG85 312 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 OR52B6Q8NGF0 335 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 SLC5A11Q8WWX8 675 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 NEIL2Q969S2 332 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 AHCYL2Q96HN2 611 aaKnown RBP13.78□□□□□ -0.2
COL16A1-217ENST00000532877 ZNF382Q96SR6 550 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 C20orf27Q9GZN8 174 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 CCDC134Q9H6E4 229 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 IPPKQ9H8X2 491 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 POMT2Q9UKY4 750 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 HELZ2Q9BYK8 2649 aaKnown RBP13.78□□□□□ -0.2
COL16A1-217ENST00000532877 ASH1LQ9NR48 2969 aaKnown RBP13.78□□□□□ -0.2
COL16A1-217ENST00000532877 HEATR5BQ9P2D3 2071 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 UNC13CQ8NB66 2214 aa13.78□□□□□ -0.2
COL16A1-217ENST00000532877 FLNBO75369 2602 aaKnown RBP13.77□□□□□ -0.2
COL16A1-217ENST00000532877 A0A1B0GTL3 188 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 TAF4O00268 1085 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 UBFD1O14562 309 aaKnown RBP13.77□□□□□ -0.21
COL16A1-217ENST00000532877 CASC3O15234 703 aaKnown RBP13.77□□□□□ -0.21
COL16A1-217ENST00000532877 ZW10O43264 779 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 CCNDBP1O95273 360 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 HSPA4LO95757 839 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 CDH1P12830 882 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 GNAZP19086 355 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 ACP1P24666 158 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 CD1CP29017 333 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 PRDX3P30048 256 aaKnown RBP13.77□□□□□ -0.21
COL16A1-217ENST00000532877 CSF2RBP32927 897 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 SLC1A6P48664 564 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 CCNG1P51959 295 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 GFERP55789 205 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 PRDX1Q06830 199 aaKnown RBP13.77□□□□□ -0.21
COL16A1-217ENST00000532877 GALNT1Q10472 559 aaPredicted RBP13.77□□□□□ -0.21
COL16A1-217ENST00000532877 SF1Q15637 639 aaKnown RBP13.77□□□□□ -0.21
COL16A1-217ENST00000532877 SLC5A12Q1EHB4 618 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 IRGCQ6NXR0 463 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 PIP4P1Q86T03 277 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 TMPRSS11BQ86T26 416 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 C17orf64Q86WR6 236 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 FAM20CQ8IXL6 584 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 DCBLD1Q8N8Z6 715 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 AGAP11Q8TF27 550 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 SORT1Q99523 831 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 CAPS2Q9BXY5 557 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 SHCBP1LQ9BZQ2 653 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 ZMYND15Q9H091 742 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 ABCG4Q9H172 646 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 ZNF395Q9H8N7 513 aaPredicted RBP13.77□□□□□ -0.21
COL16A1-217ENST00000532877 SLC6A20Q9NP91 592 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 CUEDC1Q9NWM3 386 aaPredicted RBP13.77□□□□□ -0.21
COL16A1-217ENST00000532877 STK38LQ9Y2H1 464 aa13.77□□□□□ -0.21
COL16A1-217ENST00000532877 MN1Q10571 1320 aaPredicted RBP13.76□□□□□ -0.21
COL16A1-217ENST00000532877 IGKV1-8A0A0C4DH67 115 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 CLGNO14967 610 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 CAPN5O15484 640 aaPredicted RBP13.76□□□□□ -0.21
COL16A1-217ENST00000532877 PRAMEF4O60810 478 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 OTCP00480 354 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 CAPNS1P04632 268 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 RPLP0P05388 317 aaKnown RBP13.76□□□□□ -0.21
COL16A1-217ENST00000532877 GP1BAP07359 652 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 SPINK2P20155 84 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 CMPK1P30085 196 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 ARL1P40616 181 aaPredicted RBP13.76□□□□□ -0.21
COL16A1-217ENST00000532877 LSSP48449 732 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 ACADVLP49748 655 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 PKNOX1P55347 436 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 SH3BP2P78314 561 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 CCL7P80098 99 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 ABATP80404 500 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 OCRLQ01968 901 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 CFHR1Q03591 330 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 PCDH1Q08174 1060 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 CHIT1Q13231 466 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 CATSPEREQ5SY80 951 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 PRAMEF9Q5VWM5 478 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 KIAA1614Q5VZ46 1190 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 LETMD1Q6P1Q0 360 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 SLCO4C1Q6ZQN7 724 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 GPRIN3Q6ZVF9 776 aa13.76□□□□□ -0.21
COL16A1-217ENST00000532877 SYVN1Q86TM6 617 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms