RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 FAM91A1Q658Y4 838 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 ARL10Q8N8L6 244 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 OR4K17Q8NGC6 315 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 PLEKHG4BQ96PX9 1271 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 UBE2QL1A1L167 161 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 HAT1O14929 419 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 PGRMC2O15173 223 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 ADAMDEC1O15204 470 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 BNIP1Q12981 228 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 SNTA1Q13424 505 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 NUP54Q7Z3B4 507 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 MAFAQ8NHW3 353 aaPredicted RBP11□□□□□ -0.65
PTPRK-221ENST00000532331 DCAKDQ8WVC6 231 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 DNAAF2Q9NVR5 837 aaKnown RBP11□□□□□ -0.65
PTPRK-221ENST00000532331 STATHP02808 62 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 DPY19L1Q2PZI1 675 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 LPCAT4Q643R3 524 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 SMYD5Q6GMV2 418 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 DNAJB8Q8NHS0 232 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 SPPL3Q8TCT6 385 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 ZDHHC1Q8WTX9 485 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 S100ZQ8WXG8 99 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 CIB1Q99828 191 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 RTP3Q9BQQ7 232 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 MVB12BQ9H7P6 319 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 SLC22A14Q9Y267 594 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 BCKDKO14874 412 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 CHST10O43529 356 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 COQ9O75208 318 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 GSTT1P30711 240 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 EIF2B2P49770 351 aaKnown RBP11□□□□□ -0.65
PTPRK-221ENST00000532331 ZNF234Q14588 700 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 KLHL24Q6TFL4 600 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 ANKRD46Q86W74 232 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 SLC5A11Q8WWX8 675 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 TOE1Q96GM8 510 aaKnown RBP11□□□□□ -0.65
PTPRK-221ENST00000532331 CLPTM1LQ96KA5 538 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 TSGA13Q96PP4 275 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 SPATA9Q9BWV2 254 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 DNMT3BQ9UBC3 853 aaKnown RBP11□□□□□ -0.65
PTPRK-221ENST00000532331 HCSTQ9UBK5 93 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 ZNF282Q9UDV7 671 aaPredicted RBP11□□□□□ -0.65
PTPRK-221ENST00000532331 KCTD3Q9Y597 815 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 DUXAA6NLW8 204 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 VSTM5A8MXK1 200 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 KHDRBS3O75525 346 aaKnown RBP10.99□□□□□ -0.65
PTPRK-221ENST00000532331 PLEKHS1Q5SXH7 462 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 PIGXQ8TBF5 258 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 MMABQ96EY8 250 aaPredicted RBP10.99□□□□□ -0.65
PTPRK-221ENST00000532331 HERPUD2Q9BSE4 406 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 SLC46A2Q9BY10 475 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 UBE2ZQ9H832 354 aaPredicted RBP10.99□□□□□ -0.65
PTPRK-221ENST00000532331 HSFX1Q9UBD0 423 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 RIIAD1A6NNX1 92 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 CCR10P46092 362 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 HERVK_113P63132 956 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 MRPS21P82921 87 aaKnown RBP10.99□□□□□ -0.65
PTPRK-221ENST00000532331 RGS21Q2M5E4 152 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 THAP5Q7Z6K1 395 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 CPNE8Q86YQ8 564 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 FAM81AQ8TBF8 368 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 ERVK-6Q9BXR3 956 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 HAPLN2Q9GZV7 340 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 METTL7AQ9H8H3 244 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 SLC2A6Q9UGQ3 507 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 IKZF2Q9UKS7 526 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 C9JVG2 144 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 PSMD11O00231 422 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 IL7RP16871 459 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 IMPDH1P20839 514 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 PER3P56645 1201 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 VSX2P58304 361 aaPredicted RBP10.99□□□□□ -0.65
PTPRK-221ENST00000532331 MLF2Q15773 248 aaPredicted RBP10.99□□□□□ -0.65
PTPRK-221ENST00000532331 FAM78AQ5JUQ0 283 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 LIN54Q6MZP7 749 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 AGTRAPQ6RW13 159 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 RBM44Q6ZP01 1051 aaKnown RBP10.99□□□□□ -0.65
PTPRK-221ENST00000532331 FITM2Q8N6M3 262 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 CRYGNQ8WXF5 182 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 SLCO2A1Q92959 643 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 FCRL4Q96PJ5 515 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 FAM72CH0Y354 149 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 K7ERQ8 282 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 SLC22A2O15244 555 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 THRBP10828 461 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.99□□□□□ -0.653e-6■■■■□ 20.2
PTPRK-221ENST00000532331 LACTB2Q53H82 288 aaPredicted RBP10.99□□□□□ -0.65
PTPRK-221ENST00000532331 FAM72AQ5TYM5 149 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 FAM72DQ6L9T8 149 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 ADGRG6Q86SQ4 1221 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 FAM72BQ86X60 149 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 OR10A6Q8NH74 314 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 SHKBP1Q8TBC3 707 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 TRMT2BQ96GJ1 504 aaKnown RBP10.99□□□□□ -0.65
PTPRK-221ENST00000532331 PEBP4Q96S96 227 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 COQ7Q99807 217 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 TRIM39Q9HCM9 518 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 RASSF1Q9NS23 344 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 VPS29Q9UBQ0 182 aa10.99□□□□□ -0.65
PTPRK-221ENST00000532331 TMEM59LQ9UK28 342 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms