RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 PDE9AO76083 593 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 DDNO94850 711 aaPredicted RBP4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 BAG3O95817 575 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 YES1P07947 543 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 HKR1P10072 659 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 DRD5P21918 477 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 FCARP24071 287 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 BDKRB2P30411 391 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 MMP13P45452 471 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 AVPR1BP47901 424 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 COMPP49747 757 aaPredicted RBP4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 HNRNPH2P55795 449 aaKnown RBP4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 P2RX3P56373 397 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 ACTR3P61158 418 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 UBE2HP62256 183 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 ROR2Q01974 943 aaKnown RBP4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 TNFRSF17Q02223 184 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 CACNG1Q06432 222 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 PLA2G7Q13093 441 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 GK2Q14410 553 aaPredicted RBP4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 PRKD1Q15139 912 aaPredicted RBP4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 RBBP7Q16576 425 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 TATDN3Q17R31 274 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 MCMDC2Q4G0Z9 681 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 RAB6CQ53S08 254 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 GRTP1Q5TC63 336 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 IL23RQ5VWK5 629 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 SUSD4Q5VX71 490 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 SULT1C3Q6IMI6 304 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 ZNF813Q6ZN06 617 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 FAM57BQ71RH2 274 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 RHOUQ7L0Q8 258 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 NANOGNBQ7Z5D8 188 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 TMPRSS11BQ86T26 416 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 ADGRG3Q86Y34 549 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 ZNF444Q8N0Y2 327 aaPredicted RBP4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 C1orf52Q8N6N3 182 aaKnown RBP4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 PCDH20Q8N6Y1 951 aaKnown RBP4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 ZNF397Q8NF99 534 aaPredicted RBP4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 OR2T3Q8NH03 318 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 MIPOL1Q8TD10 442 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 ATP8B4Q8TF62 1192 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 ANKRD49Q8WVL7 239 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 TRIB2Q92519 343 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 FCGR1BQ92637 280 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 NCLNQ969V3 563 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 FAM46BQ96A09 425 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 PINX1Q96BK5 328 aaKnown RBP4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 REPS1Q96D71 796 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 PHF21BQ96EK2 531 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 TAAR6Q96RI8 345 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 ZNF607Q96SK3 696 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 MRPL13Q9BYD1 178 aaKnown RBP4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 RAB6CQ9H0N0 254 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 SIRPDQ9H106 197 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 VCX2Q9H322 139 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 ACTL8Q9H568 366 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 Q9N2K0 584 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 CNGB3Q9NQW8 809 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 ACOXLQ9NUZ1 547 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 PKD2L2Q9NZM6 624 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 ARPP21Q9UBL0 812 aaPredicted RBP4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 NOCTQ9UK39 431 aaKnown RBP4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 UTS2RQ9UKP6 389 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 PSME2Q9UL46 239 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 PAM16Q9Y3D7 125 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 KLK4Q9Y5K2 254 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 KANK1Q14678 1352 aa4.1□□□□□ -1.75
AC055878.1-201ENST00000531858 FAM240BA0A1B0GVZ2 78 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 MED19A0JLT2 244 aaPredicted RBP4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 ERICH4A6NGS2 130 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 C2CD4BA6NLJ0 364 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 F8VVB4 439 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 F8VWA3 439 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 STMND1H3BQB6 276 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 M0QX08 132 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 PRRG1O14668 218 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 XPO1O14980 1071 aaKnown RBP4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 SPOPO43791 374 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 SNX3O60493 162 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 FOXD2O60548 495 aaPredicted RBP4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 ESRRBO95718 433 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 GSRP00390 522 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 APRTP07741 180 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 IQCF3P0C7M6 154 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 RRASP10301 218 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 CLUP10909 449 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 INSRRP14616 1297 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 RPA2P15927 270 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 DPP4P27487 766 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 PTPN6P29350 595 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 HLA-FP30511 346 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 EIF2S3P41091 472 aaKnown RBP4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 CETN2P41208 172 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 MAGEA11P43364 429 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 RPL23AP62750 156 aaKnown RBP4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 DSC1Q08554 894 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 PNRC1Q12796 327 aaPredicted RBP4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 TROAPQ12815 778 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms