RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 BST1Q10588 318 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 LCP2Q13094 533 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 RCN2Q14257 317 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 CACHD1Q5VU97 1274 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 CES4AQ5XG92 561 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 TMPRSS9Q7Z410 1059 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 ZNF75CPQ92670 426 aaPredicted RBP16.99■□□□□ 0.31
CTSB-222ENST00000531551 ZNF395Q9H8N7 513 aaPredicted RBP16.99■□□□□ 0.31
CTSB-222ENST00000531551 SLC6A20Q9NP91 592 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 MID1IP1Q9NPA3 183 aa16.99■□□□□ 0.31
CTSB-222ENST00000531551 SLC9B1P1A6NJY1 282 aa16.98■□□□□ 0.31
CTSB-222ENST00000531551 ITM2AO43736 263 aa16.98■□□□□ 0.31
CTSB-222ENST00000531551 OTCP00480 354 aa16.98■□□□□ 0.31
CTSB-222ENST00000531551 SLC1A6P48664 564 aa16.98■□□□□ 0.31
CTSB-222ENST00000531551 SEPHS1P49903 392 aa16.98■□□□□ 0.31
CTSB-222ENST00000531551 ABCE1P61221 599 aaKnown RBP16.98■□□□□ 0.31
CTSB-222ENST00000531551 ARL13AQ5H913 290 aaPredicted RBP16.98■□□□□ 0.31
CTSB-222ENST00000531551 NXPE4Q6UWF7 544 aa16.98■□□□□ 0.31
CTSB-222ENST00000531551 MILR1Q7Z6M3 343 aa16.98■□□□□ 0.31
CTSB-222ENST00000531551 AGR3Q8TD06 166 aa16.98■□□□□ 0.31
CTSB-222ENST00000531551 CKAP2Q8WWK9 683 aa16.98■□□□□ 0.31
CTSB-222ENST00000531551 TWSG1Q9GZX9 223 aa16.98■□□□□ 0.31
CTSB-222ENST00000531551 DRC3Q9H069 523 aa16.98■□□□□ 0.31
CTSB-222ENST00000531551 COL5A1P20908 1838 aaPredicted RBP16.98■□□□□ 0.31
CTSB-222ENST00000531551 ZNF292O60281 2723 aa16.98■□□□□ 0.31
CTSB-222ENST00000531551 IGKV1-8A0A0C4DH67 115 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 A0A1B0GTL3 188 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 TLCD2A6NGC4 264 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 PRAMEF10O60809 474 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 ST6GAL1P15907 406 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 MDH1P40925 334 aaKnown RBP16.97■□□□□ 0.31
CTSB-222ENST00000531551 GRIA3P42263 894 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 CCR8P51685 355 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 NAA20P61599 178 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 ILKQ13418 452 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 DOC2AQ14183 400 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 ZNF574Q6ZN55 896 aaPredicted RBP16.97■□□□□ 0.31
CTSB-222ENST00000531551 OR4F6Q8NGB9 312 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 OR6Y1Q8NGX8 325 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 MAGEB18Q96M61 343 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 CD180Q99467 661 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 SEMA6CQ9H3T2 930 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 EML4Q9HC35 981 aaKnown RBP16.97■□□□□ 0.31
CTSB-222ENST00000531551 C1GALT1Q9NS00 363 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 SOHLH2Q9NX45 425 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 TOR4AQ9NXH8 423 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 RNF11Q9Y3C5 154 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 DMXL1Q9Y485 3027 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 MN1Q10571 1320 aaPredicted RBP16.97■□□□□ 0.31
CTSB-222ENST00000531551 IGHV5-51A0A0C4DH38 117 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 TMEM114B3SHH9 223 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 NTN3O00634 580 aaPredicted RBP16.97■□□□□ 0.31
CTSB-222ENST00000531551 UBFD1O14562 309 aaKnown RBP16.97■□□□□ 0.31
CTSB-222ENST00000531551 SLC30A4O14863 429 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 NRP2O60462 931 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 PRAMEF4O60810 478 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 CRCPO75575 148 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 OR4F21O95013 312 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 CLDN9O95484 217 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 C9P02748 559 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 C1GALT1C1LP0DN25 315 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 CSRP1P21291 193 aaKnown RBP16.97■□□□□ 0.31
CTSB-222ENST00000531551 ARRB2P32121 409 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 ARL4DP49703 201 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 NOVA1P51513 510 aaKnown RBP16.97■□□□□ 0.31
CTSB-222ENST00000531551 SH3BP2P78314 561 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 SIM1P81133 766 aaPredicted RBP16.97■□□□□ 0.31
CTSB-222ENST00000531551 E2F1Q01094 437 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 SQSTM1Q13501 440 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 SLBPQ14493 270 aaKnown RBP eCLIP16.97■□□□□ 0.31
CTSB-222ENST00000531551 PHF19Q5T6S3 580 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 PRAMEF9Q5VWM5 478 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 ATG9BQ674R7 924 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 FIGLAQ6QHK4 219 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 DHRS13Q6UX07 377 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 SLCO4C1Q6ZQN7 724 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 GPRIN3Q6ZVF9 776 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 GLRX5Q86SX6 157 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 SYVN1Q86TM6 617 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 CUZD1Q86UP6 607 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 PLD3Q8IV08 490 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 LSMEM2Q8N112 164 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 OR4D9Q8NGE8 314 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 WDR48Q8TAF3 677 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 RAB3IL1Q8TBN0 382 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 TRAPPC9Q96Q05 1148 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 TRMOQ9BU70 441 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 C20orf27Q9GZN8 174 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 SNX7Q9UNH6 387 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 FIS1Q9Y3D6 152 aa16.97■□□□□ 0.31
CTSB-222ENST00000531551 FEZF1A0PJY2 475 aa16.96■□□□□ 0.31
CTSB-222ENST00000531551 D6RAR5 112 aa16.96■□□□□ 0.31
CTSB-222ENST00000531551 EBLN1P0CF75 366 aa16.96■□□□□ 0.31
CTSB-222ENST00000531551 SERPINB5P36952 375 aa16.96■□□□□ 0.31
CTSB-222ENST00000531551 CLDN6P56747 220 aa16.96■□□□□ 0.31
CTSB-222ENST00000531551 ERVPABLB-1P60509 514 aa16.96■□□□□ 0.31
CTSB-222ENST00000531551 TRAF3Q13114 568 aa16.96■□□□□ 0.31
CTSB-222ENST00000531551 CPSF6Q16630 551 aaKnown RBP eCLIP16.96■□□□□ 0.31
CTSB-222ENST00000531551 RSPO4Q2I0M5 234 aaPredicted RBP16.96■□□□□ 0.31
CTSB-222ENST00000531551 FAM219BQ5XKK7 198 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms