RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 MAPK15Q8TD08 544 aa9.53□□□□□ -0.88
CTNND1-228ENST00000531007 SLC5A11Q8WWX8 675 aa9.53□□□□□ -0.88
CTNND1-228ENST00000531007 NELL1Q92832 810 aa9.53□□□□□ -0.88
CTNND1-228ENST00000531007 SH3KBP1Q96B97 665 aa9.53□□□□□ -0.88
CTNND1-228ENST00000531007 ERP27Q96DN0 273 aa9.53□□□□□ -0.88
CTNND1-228ENST00000531007 PPP3R2Q96LZ3 170 aa9.53□□□□□ -0.88
CTNND1-228ENST00000531007 EBF4Q9BQW3 602 aa9.53□□□□□ -0.88
CTNND1-228ENST00000531007 MENTQ9BUN1 341 aa9.53□□□□□ -0.88
CTNND1-228ENST00000531007 SHCBP1LQ9BZQ2 653 aa9.53□□□□□ -0.88
CTNND1-228ENST00000531007 MIR1-1HGQ9H1L0 117 aa9.53□□□□□ -0.88
CTNND1-228ENST00000531007 NT5DC2Q9H857 520 aa9.53□□□□□ -0.88
CTNND1-228ENST00000531007 UCK1Q9HA47 277 aa9.53□□□□□ -0.88
CTNND1-228ENST00000531007 BRF2Q9HAW0 419 aa9.53□□□□□ -0.88
CTNND1-228ENST00000531007 PRDM8Q9NQV8 689 aa9.53□□□□□ -0.88
CTNND1-228ENST00000531007 TAAR2Q9P1P5 351 aa9.53□□□□□ -0.88
CTNND1-228ENST00000531007 ZNF225Q9UK10 706 aa9.53□□□□□ -0.88
CTNND1-228ENST00000531007 TMED5Q9Y3A6 229 aa9.53□□□□□ -0.88
CTNND1-228ENST00000531007 PCDHGA2Q9Y5H1 932 aa9.53□□□□□ -0.88
CTNND1-228ENST00000531007 ENTPD2Q9Y5L3 495 aa9.53□□□□□ -0.88
CTNND1-228ENST00000531007 CSNK1G3Q9Y6M4 447 aa9.53□□□□□ -0.88
CTNND1-228ENST00000531007 ZFC3H1O60293 1989 aaKnown RBP9.53□□□□□ -0.88
CTNND1-228ENST00000531007 KCNE1BA0A087WTH5 132 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 FAM181BA6NEQ2 426 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 ERICH4A6NGS2 130 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 TMEM233B4DJY2 109 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 FOXE1O00358 373 aaPredicted RBP9.52□□□□□ -0.89
CTNND1-228ENST00000531007 MANBAO00462 879 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 PPP6CO00743 305 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 SKAP2O75563 359 aaPredicted RBP9.52□□□□□ -0.89
CTNND1-228ENST00000531007 RSL1D1O76021 490 aaKnown RBP9.52□□□□□ -0.89
CTNND1-228ENST00000531007 PDGFBP01127 241 aaPredicted RBP9.52□□□□□ -0.89
CTNND1-228ENST00000531007 PRR35P0CG20 571 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 C1GALT1C1LP0DN25 315 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 BCKDHBP21953 392 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 CALB2P22676 271 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 ITPKAP23677 461 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 EPHA3P29320 983 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 PRDX3P30048 256 aaKnown RBP9.52□□□□□ -0.89
CTNND1-228ENST00000531007 PKLRP30613 574 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 RXRGP48443 463 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 ACADVLP49748 655 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 STX1BP61266 288 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 ERVK-8P63133 956 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 CSTF1Q05048 431 aaKnown RBP9.52□□□□□ -0.89
CTNND1-228ENST00000531007 BNIP1Q12981 228 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 KIR2DS3Q14952 304 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 ZRSR2Q15696 482 aaKnown RBP9.52□□□□□ -0.89
CTNND1-228ENST00000531007 FBXO48Q5FWF7 155 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 THEMIS2Q5TEJ8 643 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 VWA5B1Q5TIE3 1220 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 PEAR1Q5VY43 1037 aaPredicted RBP9.52□□□□□ -0.89
CTNND1-228ENST00000531007 FRG2Q64ET8 278 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 NXNQ6DKJ4 435 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 MED27Q6P2C8 311 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 KLHL35Q6PF15 583 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 SLC30A9Q6PML9 568 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 IL27RAQ6UWB1 636 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 NXPE4Q6UWF7 544 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 SLCO4C1Q6ZQN7 724 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 AMIGO1Q86WK6 493 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 C17orf64Q86WR6 236 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 TMEFF1Q8IYR6 380 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 FBXL6Q8N531 539 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 ABHD11Q8NFV4 315 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 TTLQ8NG68 377 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 OR52E1Q8NGJ3 308 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 CEP76Q8TAP6 659 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 PYCR2Q96C36 320 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 TUBGCP3Q96CW5 907 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 FRG2BQ96QU4 278 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.52□□□□□ -0.89
CTNND1-228ENST00000531007 NMUR2Q9GZQ4 415 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 TWSG1Q9GZX9 223 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 WDR55Q9H6Y2 383 aaPredicted RBP9.52□□□□□ -0.89
CTNND1-228ENST00000531007 TNFRSF12AQ9NP84 129 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 ACSS2Q9NR19 701 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 ABCF3Q9NUQ8 709 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 ZSCAN32Q9NX65 697 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 ASIC5Q9NY37 505 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 RNF11Q9Y3C5 154 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 FIS1Q9Y3D6 152 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 PLEKHM1Q9Y4G2 1056 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 CAPN7Q9Y6W3 813 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 LRP4O75096 1905 aa9.52□□□□□ -0.89
CTNND1-228ENST00000531007 MUC3AQ02505 3323 aa9.51□□□□□ -0.89
CTNND1-228ENST00000531007 ZDBF2Q9HCK1 2354 aa9.51□□□□□ -0.89
CTNND1-228ENST00000531007 DYTNA2CJ06 578 aa9.51□□□□□ -0.89
CTNND1-228ENST00000531007 CAPN14A8MX76 684 aa9.51□□□□□ -0.89
CTNND1-228ENST00000531007 E7EQ34 232 aa9.51□□□□□ -0.89
CTNND1-228ENST00000531007 LMO7DNF2Z398 122 aa9.51□□□□□ -0.89
CTNND1-228ENST00000531007 UNC5CO95185 931 aa9.51□□□□□ -0.89
CTNND1-228ENST00000531007 WNT1P04628 370 aa9.51□□□□□ -0.89
CTNND1-228ENST00000531007 THRAP10827 490 aa9.51□□□□□ -0.89
CTNND1-228ENST00000531007 NCF2P19878 526 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-228ENST00000531007 AK4P27144 223 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-228ENST00000531007 MAPK1P28482 360 aa9.51□□□□□ -0.89
CTNND1-228ENST00000531007 CMPK1P30085 196 aa9.51□□□□□ -0.89
CTNND1-228ENST00000531007 GRK3P35626 688 aa9.51□□□□□ -0.89
CTNND1-228ENST00000531007 PIK3CBP42338 1070 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms