RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 KCNE1BA0A087WTH5 132 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 A0A096LPI6 279 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 A0A1B0GTL3 188 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 SLC5A10A0PJK1 596 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 ASPDHA6ND91 283 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 C16orf96A6NNT2 1141 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 GPR89AB7ZAQ6 455 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 C1QTNF3-AMACRE9PGA6 284 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 H0YIV9 168 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 GPR39O43194 453 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 VEGFDO43915 354 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 CPNE3O75131 537 aaKnown RBP5.4□□□□□ -1.54
PCF11-205ENST00000530906 SEC22BO75396 215 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 RFPL2O75678 378 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 RNASEH2AO75792 299 aaKnown RBP5.4□□□□□ -1.54
PCF11-205ENST00000530906 MYO1DO94832 1006 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 SORBS2O94875 1100 aaKnown RBP5.4□□□□□ -1.54
PCF11-205ENST00000530906 SCELO95171 688 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 GUCA1CO95843 209 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 RETP07949 1114 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 FAM58BPP0C7Q3 252 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 ELFN1P0C7U0 828 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 FAM87AP0C7U9 286 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 PABPC4LP0CB38 370 aaKnown RBP5.4□□□□□ -1.54
PCF11-205ENST00000530906 GPR89BP0CG08 455 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 G6PDP11413 515 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 CDH1P12830 882 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 SLC2A4P14672 509 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 JUPP14923 745 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 ZNF26P17031 533 aaPredicted RBP5.4□□□□□ -1.54
PCF11-205ENST00000530906 PSMC3P17980 439 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 ITGB6P18564 788 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 TCN1P20061 433 aaPredicted RBP5.4□□□□□ -1.54
PCF11-205ENST00000530906 PRPS1L1P21108 318 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 ATP6V1B2P21281 511 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 PPIBP23284 216 aaKnown RBP5.4□□□□□ -1.54
PCF11-205ENST00000530906 TEAD1P28347 426 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 GKP32189 559 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 HSD17B2P37059 387 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 RPL3P39023 403 aaKnown RBP5.4□□□□□ -1.54
PCF11-205ENST00000530906 GRIA3P42263 894 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 ASMTP46597 345 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 TRPC1P48995 793 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 HTR6P50406 440 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 ERVK-21P61565 698 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 UFM1P61960 85 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 RPL38P63173 70 aaKnown RBP5.4□□□□□ -1.54
PCF11-205ENST00000530906 LIPEQ05469 1076 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 HSPA14Q0VDF9 509 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 EPS8Q12929 822 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 RALGDSQ12967 914 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 RPA4Q13156 261 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 ABRAXAS2Q15018 415 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 KIAA0040Q15053 153 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 ATP6AP1Q15904 470 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 MAPKAPK3Q16644 382 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 HNRNPA1L2Q32P51 320 aaKnown RBP5.4□□□□□ -1.54
PCF11-205ENST00000530906 SYTL3Q4VX76 610 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 LRIF1Q5T3J3 769 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 FAM46CQ5VWP2 391 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 FRG2Q64ET8 278 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 NANOGP8Q6NSW7 305 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 UGT2A3Q6UWM9 527 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 DLEU7Q6UYE1 221 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 LIPIQ6XZB0 460 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 ZBTB49Q6ZSB9 765 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 LPCAT2Q7L5N7 544 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 GRASPQ7Z6J2 395 aaPredicted RBP5.4□□□□□ -1.54
PCF11-205ENST00000530906 KIAA2013Q8IYS2 634 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 SLC22A15Q8IZD6 547 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 LILRA2Q8N149 483 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 TMEM132CQ8N3T6 1108 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 RNF148Q8N7C7 305 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 CHST14Q8NCH0 376 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 BPIFB1Q8TDL5 484 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 SELENOMQ8WWX9 145 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 SMG7Q92540 1137 aaKnown RBP5.4□□□□□ -1.54
PCF11-205ENST00000530906 ELMO1Q92556 727 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 SMARCD2Q92925 531 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 BADQ92934 168 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 UBE2E3Q969T4 207 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 PPWD1Q96BP3 646 aaKnown RBP5.4□□□□□ -1.54
PCF11-205ENST00000530906 ZNF707Q96C28 371 aaPredicted RBP5.4□□□□□ -1.54
PCF11-205ENST00000530906 AP2M1Q96CW1 435 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 CXorf40BQ96DE9 158 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 DTD2Q96FN9 168 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 ITCHQ96J02 903 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 LINC00615Q96LM1 132 aaPredicted RBP5.4□□□□□ -1.54
PCF11-205ENST00000530906 COQ10AQ96MF6 247 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 NSMCE2Q96MF7 247 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 FRG2BQ96QU4 278 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 PKP2Q99959 881 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 CCM2Q9BSQ5 444 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 BDH2Q9BUT1 245 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 UGT2B28Q9BY64 529 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 YTHDF1Q9BYJ9 559 aaKnown RBP5.4□□□□□ -1.54
PCF11-205ENST00000530906 MRPS26Q9BYN8 205 aaKnown RBP5.4□□□□□ -1.54
PCF11-205ENST00000530906 ANKRD60Q9BZ19 345 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 KCNH6Q9H252 994 aa5.4□□□□□ -1.54
PCF11-205ENST00000530906 DPEP2Q9H4A9 486 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms