RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.39□□□□□ -0.437e-8■■■■□ 25.8
PDE4DIP-227ENST00000529945 TMPRSS11EQ9UL52 423 aa12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 PROS1P07225 676 aa12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 SRPRAP08240 638 aaKnown RBP12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 PLGLAQ15195 96 aa12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 NPTX1Q15818 432 aa12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 C21orf62-AS1Q17RA5 79 aa12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 SLC30A8Q8IWU4 369 aa12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 ACMSDQ8TDX5 336 aa12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 PGAP3Q96FM1 320 aaPredicted RBP12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 COQ10AQ96MF6 247 aa12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 COQ10BQ9H8M1 238 aa12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 CPED1A4D0V7 1026 aa12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 WASH4PA8MWX3 477 aa12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 HOXB8P17481 243 aaPredicted RBP12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 AMY2BP19961 511 aa12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 AQP2P41181 271 aa12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 RPS3AP61247 264 aaKnown RBP12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 ZDHHC21Q8IVQ6 265 aa12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 DCUN1D3Q8IWE4 304 aa12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 METTL21AQ8WXB1 218 aa12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 SEC61A2Q9H9S3 476 aa12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 LAMP5Q9UJQ1 280 aa12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 MDC1Q14676 2089 aaKnown RBP12.39□□□□□ -0.43
PDE4DIP-227ENST00000529945 ERVK-7P63135 1459 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 SNRNP70P08621 437 aaKnown RBP12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 NR4A2P43354 598 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 KIR3DL1P43629 444 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 BST1Q10588 318 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 NEPROQ6NW34 567 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 PXKQ7Z7A4 578 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 ANKRD46Q86W74 232 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 PATZ1Q9HBE1 687 aaKnown RBP12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 ADAM28Q9UKQ2 775 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 CDH10Q9Y6N8 788 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 PRDM15P57071 1507 aaPredicted RBP12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 C2orf72A6NCS6 295 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 QPCTQ16769 361 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 SAMD12Q8N8I0 201 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 NKX2-3Q8TAU0 364 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 SLC25A44Q96H78 314 aaPredicted RBP12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 NUP214P35658 2090 aaPredicted RBP12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 TGDSO95455 350 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 SCGB1C2P0DMR2 95 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 ZDHHC17Q8IUH5 632 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 LZTR1Q8N653 840 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 NCDNQ9UBB6 729 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 ADGRL3Q9HAR2 1447 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 MRPS10P82664 201 aaKnown RBP12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 C2orf80Q0P641 193 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 HACL1Q9UJ83 578 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 ZNF335Q9H4Z2 1342 aaPredicted RBP12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 A0A0J9YVX5 310 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 KDM6BO15054 1643 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 HSF1Q00613 529 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 PTPRRQ15256 657 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 UPP1Q16831 310 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 VIRMAQ69YN4 1812 aaKnown RBP12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 NXPE1Q8N323 547 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 LRTM1Q9HBL6 345 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 PUS1Q9Y606 427 aaKnown RBP eCLIP12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 BMP6P22004 513 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 TMEM214Q6NUQ4 689 aaKnown RBP12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 ANKRD54Q6NXT1 300 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 PAQR8Q8TEZ7 354 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 EXOSC8Q96B26 276 aaKnown RBP12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 C11orf84Q9BUA3 381 aaPredicted RBP12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 GLTPQ9NZD2 209 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 NPEPPSL1A6NEC2 478 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 KERAO60938 352 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 PTTG1IPP53801 180 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 CSGALNACT1Q8TDX6 532 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 ZBED3Q96IU2 234 aaPredicted RBP12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 ACTR6Q9GZN1 396 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 ZDHHC11Q9H8X9 412 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 POLHQ9Y253 713 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 ZNF510Q9Y2H8 683 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 ADAM18Q9Y3Q7 739 aa12.38□□□□□ -0.43
PDE4DIP-227ENST00000529945 ZNF850A8MQ14 1090 aa12.37□□□□□ -0.43
PDE4DIP-227ENST00000529945 LHX1P48742 406 aa12.37□□□□□ -0.43
PDE4DIP-227ENST00000529945 CRB2Q5IJ48 1285 aa12.37□□□□□ -0.43
PDE4DIP-227ENST00000529945 SLC8B1Q6J4K2 584 aa12.37□□□□□ -0.43
PDE4DIP-227ENST00000529945 UNC5AQ6ZN44 842 aa12.37□□□□□ -0.43
PDE4DIP-227ENST00000529945 P4HA3Q7Z4N8 544 aa12.37□□□□□ -0.43
PDE4DIP-227ENST00000529945 C22orf15Q8WYQ4 148 aa12.37□□□□□ -0.43
PDE4DIP-227ENST00000529945 ZDHHC12Q96GR4 267 aa12.37□□□□□ -0.43
PDE4DIP-227ENST00000529945 TIMM29Q9BSF4 260 aa12.37□□□□□ -0.43
PDE4DIP-227ENST00000529945 QRSL1Q9H0R6 528 aaKnown RBP12.37□□□□□ -0.43
PDE4DIP-227ENST00000529945 C16orf59Q7L2K0 433 aa12.37□□□□□ -0.43
PDE4DIP-227ENST00000529945 FAM129CQ86XR2 697 aa12.37□□□□□ -0.43
PDE4DIP-227ENST00000529945 PGM2Q96G03 612 aa12.37□□□□□ -0.43
PDE4DIP-227ENST00000529945 HTATIP2Q9BUP3 242 aa12.37□□□□□ -0.43
PDE4DIP-227ENST00000529945 ZNF609O15014 1411 aa12.37□□□□□ -0.43
PDE4DIP-227ENST00000529945 PIP5K1BO14986 540 aa12.37□□□□□ -0.43
PDE4DIP-227ENST00000529945 SLC7A4O43246 635 aa12.37□□□□□ -0.43
PDE4DIP-227ENST00000529945 RAB27AP51159 221 aa12.37□□□□□ -0.43
PDE4DIP-227ENST00000529945 ERVK-9P63128 1117 aa12.37□□□□□ -0.43
PDE4DIP-227ENST00000529945 PSPHP78330 225 aa12.37□□□□□ -0.43
PDE4DIP-227ENST00000529945 C19orf35Q6ZS72 473 aa12.37□□□□□ -0.43
PDE4DIP-227ENST00000529945 MCATQ8IVS2 390 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms