RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 PMP22Q01453 160 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 ALDH6A1Q02252 535 aaKnown RBP8.55□□□□□ -1.04
VPS11-203ENST00000529545 DHX9Q08211 1270 aaKnown RBP8.55□□□□□ -1.04
VPS11-203ENST00000529545 HSPA14Q0VDF9 509 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 MSLNQ13421 630 aaPredicted RBP8.55□□□□□ -1.04
VPS11-203ENST00000529545 SPARCL1Q14515 664 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 NAA25Q14CX7 972 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 ASTE1Q2TB18 679 aaPredicted RBP8.55□□□□□ -1.04
VPS11-203ENST00000529545 DENND5AQ6IQ26 1287 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 DARS2Q6PI48 645 aaKnown RBP8.55□□□□□ -1.04
VPS11-203ENST00000529545 UNC5DQ6UXZ4 953 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 BBS12Q6ZW61 710 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 KATNAL2Q8IYT4 538 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 SLC22A15Q8IZD6 547 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 DTWD1Q8N5C7 304 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 MEIOBQ8N635 442 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 LMNTD1Q8N9Z9 388 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 OR8K1Q8NGG5 319 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 CA5BP1Q8WTZ4 195 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 METTL21AQ8WXB1 218 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 RAD51AP1Q96B01 352 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 CCDC42Q96M95 316 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 GPR137Q96N19 417 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 SPATA13Q96N96 652 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 TUBB6Q9BUF5 446 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 HEMGNQ9BXL5 484 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 C10orf88Q9H8K7 445 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 ZFAND3Q9H8U3 227 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 MKKSQ9NPJ1 570 aaPredicted RBP8.55□□□□□ -1.04
VPS11-203ENST00000529545 PGPEP1Q9NXJ5 209 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 COQ3Q9NZJ6 369 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 CIDEBQ9UHD4 219 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 MRFAP1Q9Y605 127 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 CSMD2Q7Z408 3487 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 NCOA6Q14686 2063 aaPredicted RBP8.55□□□□□ -1.04
VPS11-203ENST00000529545 CACNA1CQ13936 2221 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 GOLGA6L19H0YKK7 550 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 CTSVO60911 334 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 CELA2AP08217 269 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 TPM1P09493 284 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 RBP3P10745 1247 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 TPH1P17752 444 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 EEF1DP29692 281 aaKnown RBP8.54□□□□□ -1.04
VPS11-203ENST00000529545 EIF3EP60228 445 aaKnown RBP8.54□□□□□ -1.04
VPS11-203ENST00000529545 POU6F1Q14863 301 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 IQCB1Q15051 598 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 TMED2Q15363 201 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 FRMPD2BQ6IN97 320 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 Q6ZPB1 254 aaPredicted RBP8.54□□□□□ -1.04
VPS11-203ENST00000529545 NEK10Q6ZWH5 1172 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 FAM98AQ8NCA5 519 aaKnown RBP8.54□□□□□ -1.04
VPS11-203ENST00000529545 MVB12AQ96EY5 273 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 MRFAP1L1Q96HT8 127 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 ZNF354BQ96LW1 612 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 IL17FQ96PD4 163 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 ZFYVE21Q9BQ24 234 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 MENTQ9BUN1 341 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 ENKD1Q9H0I2 346 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 ZNF700Q9H0M5 742 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 LRRC40Q9H9A6 602 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 SPTLC3Q9NUV7 552 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 INTUQ9ULD6 942 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 ZNF835Q9Y2P0 537 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 PCDHGB6Q9Y5F9 930 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 ALG6Q9Y672 507 aa8.54□□□□□ -1.04
VPS11-203ENST00000529545 LOC102723996A0A087X1L8 192 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 LOC105369274A0A096LPK9 316 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 LOC102723532A0A0G2JNH3 316 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 FOXO6A8MYZ6 492 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 NPIPA5E9PKD4 350 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 PRRG2O14669 202 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 VPS26AO75436 327 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 MED26O95402 600 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 TSPAN12O95859 305 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 GAS8O95995 478 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 CD99P14209 185 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 CMPK1P30085 196 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 CETN2P41208 172 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 TCEAL1Q15170 157 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 OR4N4Q8N0Y3 316 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 LINC00528Q8N1L1 170 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 GHDCQ8N2G8 530 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 HORMAD2Q8N7B1 307 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 TMEM178AQ8NBL3 297 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 OR2L3Q8NG85 312 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 ACTL9Q8TC94 416 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 MAGEC3Q8TD91 643 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 PHF10Q8WUB8 498 aaKnown RBP8.53□□□□□ -1.04
VPS11-203ENST00000529545 SKA2Q8WVK7 121 aaPredicted RBP8.53□□□□□ -1.04
VPS11-203ENST00000529545 SDCCAG3Q96C92 435 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 MMABQ96EY8 250 aaPredicted RBP8.53□□□□□ -1.04
VPS11-203ENST00000529545 FOPNLQ96NB1 174 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 DNAJC7Q99615 494 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 MIPEPQ99797 713 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 UTP23Q9BRU9 249 aaKnown RBP8.53□□□□□ -1.04
VPS11-203ENST00000529545 CARD6Q9BX69 1037 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 TGIF2Q9GZN2 237 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 TSPAN10Q9H1Z9 355 aaPredicted RBP8.53□□□□□ -1.04
VPS11-203ENST00000529545 KLHL1Q9NR64 748 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 UTP6Q9NYH9 597 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms