RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 NPHS2Q9NP85 383 aa23.81■■□□□ 1.4
LDLRAD3-203ENST00000528989 DNAJC15Q9Y5T4 150 aa23.81■■□□□ 1.4
LDLRAD3-203ENST00000528989 FAM221BA6H8Z2 402 aa23.8■■□□□ 1.4
LDLRAD3-203ENST00000528989 AZIN1O14977 448 aa23.8■■□□□ 1.4
LDLRAD3-203ENST00000528989 CD59P13987 128 aa23.8■■□□□ 1.4
LDLRAD3-203ENST00000528989 LSSP48449 732 aa23.8■■□□□ 1.4
LDLRAD3-203ENST00000528989 NXPE4Q6UWF7 544 aa23.8■■□□□ 1.4
LDLRAD3-203ENST00000528989 CPLX4Q7Z7G2 160 aa23.8■■□□□ 1.4
LDLRAD3-203ENST00000528989 OOSP2Q86WS3 158 aa23.8■■□□□ 1.4
LDLRAD3-203ENST00000528989 RFWD2Q8NHY2 731 aa23.8■■□□□ 1.4
LDLRAD3-203ENST00000528989 METTL6Q8TCB7 284 aa23.8■■□□□ 1.4
LDLRAD3-203ENST00000528989 SLC6A20Q9NP91 592 aa23.8■■□□□ 1.4
LDLRAD3-203ENST00000528989 MRPS30Q9NP92 439 aaKnown RBP23.8■■□□□ 1.4
LDLRAD3-203ENST00000528989 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.8■■□□□ 1.4
LDLRAD3-203ENST00000528989 PCDHGB2Q9Y5G2 931 aa23.8■■□□□ 1.4
LDLRAD3-203ENST00000528989 PTGDR2Q9Y5Y4 395 aa23.8■■□□□ 1.4
LDLRAD3-203ENST00000528989 RP1P56715 2156 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 IGHV1OR21-1A0A087WYE8 117 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 EME2A4GXA9 379 aaPredicted RBP23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 C4orf47A7E2U8 309 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 FGF4P08620 206 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 GRK6P43250 576 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 USP53Q70EK8 1073 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 MAVSQ7Z434 540 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 WDR75Q8IWA0 830 aaKnown RBP23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 L3MBTL4Q8NA19 623 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 RHBDD1Q8TEB9 315 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 NCSTNQ92542 709 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 CCT8L2Q96SF2 557 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 HBEGFQ99075 208 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 TMEM9BQ9NQ34 198 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 FARSBQ9NSD9 589 aaKnown RBP23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 EVA1BQ9NVM1 165 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 DCTN4Q9UJW0 460 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 ASCC3Q8N3C0 2202 aaKnown RBP23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 KCNE1BA0A087WTH5 132 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 C2orf74A8MZ97 194 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 PRAMEF10O60809 474 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 C1GALT1C1LP0DN25 315 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 HGFP14210 728 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 CAPZBP47756 277 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 CFHR1Q03591 330 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 PCDH1Q08174 1060 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 VWA5B1Q5TIE3 1220 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 ADNP2Q6IQ32 1131 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 SCIMPQ6UWF3 145 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 CLYBLQ8N0X4 340 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 SLC22A18Q96BI1 424 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 MTFMTQ96DP5 389 aaKnown RBP23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 ELAC2Q9BQ52 826 aaKnown RBP23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 DPH7Q9BTV6 452 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 ABCG4Q9H172 646 aa23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 GEMIN8Q9NWZ8 242 aaKnown RBP23.79■■□□□ 1.4
LDLRAD3-203ENST00000528989 MATN2O00339 956 aa23.78■■□□□ 1.4
LDLRAD3-203ENST00000528989 SH3BP5O60239 455 aa23.78■■□□□ 1.4
LDLRAD3-203ENST00000528989 SKAP2O75563 359 aaPredicted RBP23.78■■□□□ 1.4
LDLRAD3-203ENST00000528989 CRCPO75575 148 aa23.78■■□□□ 1.4
LDLRAD3-203ENST00000528989 CKMT1AP12532 417 aa23.78■■□□□ 1.4
LDLRAD3-203ENST00000528989 PVRP15151 417 aa23.78■■□□□ 1.4
LDLRAD3-203ENST00000528989 GPR3P46089 330 aa23.78■■□□□ 1.4
LDLRAD3-203ENST00000528989 NR1D2Q14995 579 aa23.78■■□□□ 1.4
LDLRAD3-203ENST00000528989 PDCD2Q16342 344 aaPredicted RBP23.78■■□□□ 1.4
LDLRAD3-203ENST00000528989 AASDHQ4L235 1098 aaPredicted RBP23.78■■□□□ 1.4
LDLRAD3-203ENST00000528989 KANK2Q63ZY3 851 aa23.78■■□□□ 1.4
LDLRAD3-203ENST00000528989 ATG9BQ674R7 924 aa23.78■■□□□ 1.4
LDLRAD3-203ENST00000528989 IRGCQ6NXR0 463 aa23.78■■□□□ 1.4
LDLRAD3-203ENST00000528989 SPESP1Q6UW49 350 aa23.78■■□□□ 1.4
LDLRAD3-203ENST00000528989 ABHD11Q8NFV4 315 aa23.78■■□□□ 1.4
LDLRAD3-203ENST00000528989 TUBB1Q9H4B7 451 aa23.78■■□□□ 1.4
LDLRAD3-203ENST00000528989 ENTPD2Q9Y5L3 495 aa23.78■■□□□ 1.4
LDLRAD3-203ENST00000528989 FEZF1A0PJY2 475 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 ZNF195O14628 629 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 LRP3O75074 770 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 SNUPNO95149 360 aaKnown RBP23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 HOXB3P14651 431 aaPredicted RBP23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 CD1CP29017 333 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 CASP2P42575 452 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 HTR6P50406 440 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 NEK2P51955 445 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 GFERP55789 205 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 LIPJQ5W064 366 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 ARMC6Q6NXE6 501 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 EFL1Q7Z2Z2 1120 aaKnown RBP23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 ADCK2Q7Z695 626 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 SPRED1Q7Z699 444 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 FAM129CQ86XR2 697 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 PLD3Q8IV08 490 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 GRAMD1AQ96CP6 724 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 PTCD3Q96EY7 689 aaKnown RBP23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 AHCYL2Q96HN2 611 aaKnown RBP23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 NUF2Q9BZD4 464 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 KCNK13Q9HB14 408 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 ZNF490Q9ULM2 529 aaPredicted RBP23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 BTRCQ9Y297 605 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 SNRNP200O75643 2136 aaKnown RBP23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 CAPN5O15484 640 aaPredicted RBP23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 KIF1CO43896 1103 aaKnown RBP23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 UROSP10746 265 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 JUPP14923 745 aa23.77■■□□□ 1.4
LDLRAD3-203ENST00000528989 MAGP20916 626 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms