RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 RFXAPO00287 272 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 GSTA4O15217 222 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 PCCBP05166 539 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 LYNP07948 512 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 CDH1P12830 882 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 CXCR2P25025 360 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 SERPINB1P30740 379 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 PIK3CBP42338 1070 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 KIR3DL1P43629 444 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 POLE2P56282 527 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 TBPL1P62380 186 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 TAP2Q03519 686 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 DMPKQ09013 629 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 NFE2L1Q14494 772 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 NAIF1Q69YI7 327 aaPredicted RBP14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 GALNT18Q6P9A2 607 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 CRTC3Q6UUV7 619 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 ZBTB49Q6ZSB9 765 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 LRRC56Q8IYG6 542 aaPredicted RBP14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 KRT78Q8N1N4 520 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 KRTCAP2Q8N6L1 136 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 PLA2G15Q8NCC3 412 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 OR2T12Q8NG77 320 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 SLC5A11Q8WWX8 675 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 BIRC7Q96CA5 298 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 C11orf24Q96F05 449 aaPredicted RBP14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 ZNF597Q96LX8 424 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 PAIP1Q9H074 479 aaKnown RBP14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 AGPAT4Q9NRZ5 378 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 ASF1AQ9Y294 204 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 ELOVL7A1L3X0 281 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 EVPLLA8MZ36 301 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 FAM220BPB1ANY3 271 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 ANHXE9PGG2 379 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 DFNA5O60443 496 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 TIPRLO75663 272 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 SMNDC1O75940 238 aaKnown RBP eCLIP14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 DNTTP04053 509 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 IL1RNP18510 177 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 CTBSQ01459 385 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 ABHD18Q0P651 414 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 PDK3Q15120 406 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 DUOXA1Q1HG43 343 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 FAM98BQ52LJ0 330 aaKnown RBP14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 TMTC4Q5T4D3 741 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 ANXA8L1Q5VT79 327 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 NXPE4Q6UWF7 544 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 XKR5Q6UX68 686 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 CAMKMTQ7Z624 323 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 OR5K2Q8NHB8 316 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 TFGQ92734 400 aaPredicted RBP14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 NELL1Q92832 810 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 NEIL2Q969S2 332 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 TSSK3Q96PN8 268 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 TIMM29Q9BSF4 260 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 BDH2Q9BUT1 245 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 WDR26Q9H7D7 661 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 C8orf33Q9H7E9 229 aaPredicted RBP14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 PELI2Q9HAT8 420 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 PREBQ9HCU5 417 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 INVSQ9Y283 1065 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 TMEM98Q9Y2Y6 226 aa14.27□□□□□ -0.12
ECHDC1-220ENST00000528402 CROCCQ5TZA2 2017 aa14.27□□□□□ -0.13
ECHDC1-220ENST00000528402 A0A1W2PP55 124 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 TXNDC9O14530 226 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 RFXANKO14593 260 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 PLRG1O43660 514 aaKnown RBP14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 HOXC4P09017 264 aaPredicted RBP14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 ERGP11308 486 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 PCNAP12004 261 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 MYCLP1P12525 358 aaPredicted RBP14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 PPIBP23284 216 aaKnown RBP14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 TIE1P35590 1138 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 CHN2P52757 468 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 OR4D2P58180 307 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 MTPNP58546 118 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 PRKCQQ04759 706 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 ATP6AP1Q15904 470 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 CYP2A13Q16696 494 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 PGS1Q32NB8 556 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 HMBOX1Q6NT76 420 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 TMPRSS11BQ86T26 416 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 RALGPS2Q86X27 583 aaPredicted RBP14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 TP53I13Q8NBR0 393 aaPredicted RBP14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 HUS1BQ8NHY5 278 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 MTERF1Q99551 399 aaKnown RBP14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 SPATA9Q9BWV2 254 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 TRIT1Q9H3H1 467 aaKnown RBP14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 KAT8Q9H7Z6 458 aaKnown RBP14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 NT5DC2Q9H857 520 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 COQ10BQ9H8M1 238 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 ZDHHC4Q9NPG8 344 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 FBXL12Q9NXK8 326 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 AHSPQ9NZD4 102 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 DLGAP2Q9P1A6 1054 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 BTNL2Q9UIR0 455 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 CORO2BQ9UQ03 480 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 WBP11Q9Y2W2 641 aaKnown RBP14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 PCDHB14Q9Y5E9 798 aa14.26□□□□□ -0.13
ECHDC1-220ENST00000528402 GMEB1Q9Y692 573 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms