RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	PIAS1	O75925	651 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	CCNDBP1	O95273	360 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	ONECUT2	O95948	504 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	PDGFA	P04085	211 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	UMOD	P07911	640 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	IL2	P60568	153 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	TBPL1	P62380	186 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	ABAT	P80404	500 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	CALCOCO2	Q13137	446 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	PDAP1	Q13442	181 aa	Known RBP	11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	ATP1A4	Q13733	1029 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	PRTG	Q2VWP7	1150 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	YOD1	Q5VVQ6	348 aa	Predicted RBP	11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	FAM45BP	Q6NSW5	357 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	TMEM207	Q6UWW9	146 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	CAPN12	Q6ZSI9	719 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	MRGPRE	Q86SM8	312 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	SLC26A11	Q86WA9	606 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	TTC29	Q8NA56	475 aa	Predicted RBP	11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	OR2Y1	Q8NGV0	311 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	FAM45A	Q8TCE6	357 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	MCOLN3	Q8TDD5	553 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	FKBP10	Q96AY3	582 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	C10orf90	Q96M02	699 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	CCDC138	Q96M89	665 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	MCMBP	Q9BTE3	642 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	ING2	Q9H160	280 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	PARVB	Q9HBI1	364 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	SAYSD1	Q9NPB0	183 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	SMYD2	Q9NRG4	433 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	ABCF3	Q9NUQ8	709 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	NDOR1	Q9UHB4	597 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	GPN3	Q9UHW5	284 aa	Predicted RBP	11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	PTRH2	Q9Y3E5	179 aa	Known RBP	11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362	SPTB	P11277	2137 aa		11.24	□□□□□ -0.61
PSMC3-205	ENST00000528362		H0YGG7	62 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	PYCARD-AS1	I3L0S3	204 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362		J3QKU1	62 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	SLC16A5	O15375	505 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	EIF2S1	P05198	315 aa	Known RBP	11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	EZR	P15311	586 aa	Known RBP	11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	OTX2	P32243	289 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	FOLR3	P41439	243 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	OR1D4	P47884	311 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	ARF3	P61204	181 aa	Predicted RBP	11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	TRADD	Q15628	312 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	ZXDC	Q2QGD7	858 aa	Predicted RBP	11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	THEMIS2	Q5TEJ8	643 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	TCTN3	Q6NUS6	607 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	ZDHHC24	Q6UX98	284 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	ATG14	Q6ZNE5	492 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	STRA8	Q7Z7C7	330 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	RAB43	Q86YS6	212 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	ARHGEF39	Q8N4T4	335 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	METTL27	Q8N6F8	245 aa	Predicted RBP	11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	PYROXD1	Q8WU10	500 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	C16orf45	Q96MC5	204 aa	Predicted RBP	11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	OR2A5	Q96R48	311 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	CCDC177	Q9NQR7	707 aa	Predicted RBP	11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	ACSS2	Q9NR19	701 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	CTSF	Q9UBX1	484 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	IKZF3	Q9UKT9	509 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	SH2B3	Q9UQQ2	575 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	UTP11	Q9Y3A2	253 aa	Known RBP	11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	MAU2	Q9Y6X3	613 aa		11.23	□□□□□ -0.61
PSMC3-205	ENST00000528362	FAM95C	A0A1B0GW59	222 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	HYKK	A2RU49	373 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	CXorf49	A8MYA2	514 aa	Predicted RBP	11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362		H7BY64	318 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	EIF3H	O15372	352 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	CEACAM4	O75871	244 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	CD63	P08962	238 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	ZNF37A	P17032	561 aa	Predicted RBP	11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	SAT1	P21673	171 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	SSTR1	P30872	391 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	CCL11	P51671	97 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	PLTP	P55058	493 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	TAS2R39	P59534	338 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	RELA	Q04206	551 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	NAE1	Q13564	534 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	ZNF460	Q14592	562 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	SSPN	Q14714	243 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	NKG7	Q16617	165 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	HKDC1	Q2TB90	917 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	FAM214A	Q32MH5	1076 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	PRAMEF13	Q5VWM6	474 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	AGTRAP	Q6RW13	159 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	ASB18	Q6ZVZ8	466 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	MED25	Q71SY5	747 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	OVCH1	Q7RTY7	1134 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	PPP1R32	Q7Z5V6	425 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	ADCK2	Q7Z695	626 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	PLD3	Q8IV08	490 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	PALM2	Q8IXS6	379 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	CSNK1A1L	Q8N752	337 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	FBXO25	Q8TCJ0	367 aa		11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	PDLIM5	Q96HC4	596 aa	Known RBP	11.22	□□□□□ -0.61
PSMC3-205	ENST00000528362	PRAP1	Q96NZ9	151 aa		11.22	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms