RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 HIST1H2AHQ96KK5 128 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 HIST1H2AJQ99878 128 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 H2AFJQ9BTM1 129 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 TRIM54Q9BYV2 358 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 SLC6A20Q9NP91 592 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 STOX2Q9P2F5 926 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 SLC17A6Q9P2U8 582 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 NDOR1Q9UHB4 597 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 ADAMTS6Q9UKP5 1117 aa11.59□□□□□ -0.55
TRAPPC4-209ENST00000528230 PIEZO2Q9H5I5 2752 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 LOC105369274A0A096LPK9 316 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 IGKV1-8A0A0C4DH67 115 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 LOC102723532A0A0G2JNH3 316 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 HYKKA2RU49 373 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 TXNDC9O14530 226 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 ENO2P09104 434 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 PLA2G2AP14555 144 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 EZRP15311 586 aaKnown RBP11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 PLTPP55058 493 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 AP1S2P56377 157 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 NFKB2Q00653 900 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 TSTA3Q13630 321 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 THEMIS2Q5TEJ8 643 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 FRMPD2BQ6IN97 320 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 PRMT9Q6P2P2 845 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 MED25Q71SY5 747 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 OVCH1Q7RTY7 1134 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 SPNS2Q8IVW8 549 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 OR4N4Q8N0Y3 316 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 NKAPQ8N5F7 415 aaKnown RBP11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 TMEM102Q8N9M5 508 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 OR2Y1Q8NGV0 311 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 CDKL2Q92772 493 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 OR2A5Q96R48 311 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 OLFM1Q99784 485 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 MCMBPQ9BTE3 642 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 SLC26A1Q9H2B4 701 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 RHOJQ9H4E5 214 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 WDR54Q9H977 334 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 SAYSD1Q9NPB0 183 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 CCDC177Q9NQR7 707 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 SLC22A11Q9NSA0 550 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 TMEM184CQ9NVA4 438 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 TLK1Q9UKI8 766 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 NOVA2Q9UNW9 492 aaKnown RBP11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 HEMK1Q9Y5R4 338 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 PSAT1Q9Y617 370 aa11.58□□□□□ -0.56
TRAPPC4-209ENST00000528230 FAM95CA0A1B0GW59 222 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 H0YGG7 62 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 SUV39H1O43463 412 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 URI1O94763 535 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 IGHEP01854 428 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 ZNF37AP17032 561 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 ITGAXP20702 1163 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 SSTR1P30872 391 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 FOLR3P41439 243 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 RRADP55042 308 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 ARF3P61204 181 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 WHAMMP3Q1A5X7 153 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 MUM1Q2TAK8 710 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 PRTGQ2VWP7 1150 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 LACTB2Q53H82 288 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 GARNL3Q5VVW2 1013 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 PRAMEF13Q5VWM6 474 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 AGTRAPQ6RW13 159 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 C3orf62Q6ZUJ4 267 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 FBXO25Q8TCJ0 367 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 ATL1Q8WXF7 558 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 THAP11Q96EK4 314 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 MVB12AQ96EY5 273 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 VPS39Q96JC1 886 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 C16orf45Q96MC5 204 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 SGPP1Q9BX95 441 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 ING2Q9H160 280 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 POPDC3Q9HBV1 291 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 ACSS2Q9NR19 701 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 NXT1Q9UKK6 140 aaKnown RBP11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 PTRH2Q9Y3E5 179 aaKnown RBP11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 PCDHGA9Q9Y5G4 932 aaKnown RBP11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 NUP210LQ5VU65 1888 aa11.57□□□□□ -0.56
TRAPPC4-209ENST00000528230 KCNE1BA0A087WTH5 132 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 TCRBV9S1A1TA0A576 114 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 PABPN1LA6NDY0 278 aaKnown RBP11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 ARGFXA6NJG6 315 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 H7BY64 318 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 NRP2O60462 931 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 CNOT3O75175 753 aaKnown RBP11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 EIF2S1P05198 315 aaKnown RBP11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 TAS2R39P59534 338 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 TBPL1P62380 186 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 POU4F1Q01851 419 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 NAE1Q13564 534 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 PHKG1Q16816 387 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 CAPN13Q6MZZ7 669 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 LCTLQ6UWM7 567 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 TMEM207Q6UWW9 146 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 ATG14Q6ZNE5 492 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 RERGQ96A58 199 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 FBXL8Q96CD0 374 aa11.56□□□□□ -0.56
TRAPPC4-209ENST00000528230 PRAP1Q96NZ9 151 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms