RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 OAS3Q9Y6K5 1087 aaKnown RBP14.63□□□□□ -0.07
USP47-207ENST00000527733 U3KQV3 271 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 CEP290O15078 2479 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 FAM92AA1XBS5 289 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 CXCR6O00574 342 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 SDHDO14521 159 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 IFNW1P05000 195 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 LAMP2P13473 410 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 BMP7P18075 431 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 HRH2P25021 359 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 GGT5P36269 586 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 NCBP2P52298 156 aaKnown RBP eCLIP14.63□□□□□ -0.07
USP47-207ENST00000527733 TAS2R41P59536 307 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 RAB8AP61006 207 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 NFE2L1Q14494 772 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 PIH1D2Q8WWB5 315 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 VMP1Q96GC9 406 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 SMIM14Q96QK8 99 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 KLHL25Q9H0H3 589 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 GIMAP2Q9UG22 337 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 LRRC14BA6NHZ5 514 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 PGRP06401 933 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 JUNDP17535 347 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 PSMB9P28065 219 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 DYNC1I2Q13409 638 aaKnown RBP14.62□□□□□ -0.07
USP47-207ENST00000527733 C1orf61Q13536 156 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 TOMM20Q15388 145 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 C9orf50Q5SZB4 431 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 UNC5DQ6UXZ4 953 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 VANGL1Q8TAA9 524 aaPredicted RBP14.62□□□□□ -0.07
USP47-207ENST00000527733 WDR48Q8TAF3 677 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 SETD7Q8WTS6 366 aaKnown RBP14.62□□□□□ -0.07
USP47-207ENST00000527733 NCSTNQ92542 709 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 SLC12A9Q9BXP2 914 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 C8orf4Q9NR00 106 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 IL37Q9NZH6 218 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 APOBEC3BQ9UH17 382 aaKnown RBP14.62□□□□□ -0.07
USP47-207ENST00000527733 G3V2T6 193 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 TRIM24O15164 1050 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 TBPL1P62380 186 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 BTN3A2P78410 334 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 RPA4Q13156 261 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 TOR1AIP1Q5JTV8 583 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 CYP4V2Q6ZWL3 525 aaPredicted RBP14.62□□□□□ -0.07
USP47-207ENST00000527733 DNASE1L2Q92874 299 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 CLIC1O00299 241 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 UGT2B17O75795 530 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 MRPS21P82921 87 aaKnown RBP14.62□□□□□ -0.07
USP47-207ENST00000527733 ALG11Q2TAA5 492 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 LIMS2Q7Z4I7 341 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 DEPDC4Q8N2C3 294 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 RORBQ92753 470 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 ADAP2Q9NPF8 381 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 IGSF5Q9NSI5 407 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 IMPDH2P12268 514 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 ITPKBP27987 946 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 ARCN1P48444 511 aaKnown RBP14.62□□□□□ -0.07
USP47-207ENST00000527733 RGS8P57771 180 aaPredicted RBP14.62□□□□□ -0.07
USP47-207ENST00000527733 ABATP80404 500 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 MEF2AQ02078 507 aaPredicted RBP14.62□□□□□ -0.07
USP47-207ENST00000527733 GALNT18Q6P9A2 607 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 HIPK1Q86Z02 1210 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 FAM20CQ8IXL6 584 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 IL17FQ96PD4 163 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 RERGLQ9H628 205 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 SLC7A8Q9UHI5 535 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 PHF11Q9UIL8 331 aa14.62□□□□□ -0.07
USP47-207ENST00000527733 C2orf74A8MZ97 194 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 IGLV3-27P01718 113 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 NCK1P16333 377 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 MYL12AP19105 171 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 TAS2R50P59544 299 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 PDCD4Q53EL6 469 aaKnown RBP14.61□□□□□ -0.07
USP47-207ENST00000527733 ZNF544Q6NX49 715 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 ARMC8Q8IUR7 673 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 ASB16Q96NS5 453 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 NOL6Q9H6R4 1146 aaKnown RBP14.61□□□□□ -0.07
USP47-207ENST00000527733 FAM120CQ9NX05 1096 aaKnown RBP14.61□□□□□ -0.07
USP47-207ENST00000527733 MAT2BQ9NZL9 334 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 IRAK3Q9Y616 596 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 KIAA1217Q5T5P2 1943 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 RSL1D1O76021 490 aaKnown RBP14.61□□□□□ -0.07
USP47-207ENST00000527733 FABP3P05413 133 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 RABIFP47224 123 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 ATP4BP51164 291 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 KHDC1Q4VXA5 237 aaKnown RBP14.61□□□□□ -0.07
USP47-207ENST00000527733 SPANXN4Q5MJ08 99 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 TNFAIP8L2Q6P589 184 aaPredicted RBP14.61□□□□□ -0.07
USP47-207ENST00000527733 PLEKHM3Q6ZWE6 761 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 NXPE3Q969Y0 559 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 TSACCQ96A04 125 aaPredicted RBP14.61□□□□□ -0.07
USP47-207ENST00000527733 MOCOSQ96EN8 888 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 CIB1Q99828 191 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 PBX4Q9BYU1 374 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 REXO4Q9GZR2 422 aaKnown RBP14.61□□□□□ -0.07
USP47-207ENST00000527733 PDE10AQ9Y233 779 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 DUXAA6NLW8 204 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 SLC25A12O75746 678 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 HSD3B1P14060 373 aa14.61□□□□□ -0.07
USP47-207ENST00000527733 HSD3B2P26439 372 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms