RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 ZSWIM3Q96MP5 696 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 TUBA1CQ9BQE3 449 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 REXO4Q9GZR2 422 aaKnown RBP14.87□□□□□ -0.03
USH1C-207ENST00000527720 SOX17Q9H6I2 414 aaPredicted RBP14.87□□□□□ -0.03
USH1C-207ENST00000527720 SLC27A6Q9Y2P4 619 aa14.87□□□□□ -0.03
USH1C-207ENST00000527720 FPGTO14772 594 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 SCN2BO60939 215 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 LRATO95237 230 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 GPX2P18283 190 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 ACSM2AQ08AH3 577 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 PPIGQ13427 754 aaKnown RBP eCLIP14.86□□□□□ -0.03
USH1C-207ENST00000527720 NAE1Q13564 534 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 PLCL1Q15111 1095 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 UGT8Q16880 541 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 RFX4Q33E94 735 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 C11orf91Q3C1V1 193 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 ZNF648Q5T619 568 aaPredicted RBP14.86□□□□□ -0.03
USH1C-207ENST00000527720 ACSM2BQ68CK6 577 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 PARS2Q7L3T8 475 aaKnown RBP14.86□□□□□ -0.03
USH1C-207ENST00000527720 THAP5Q7Z6K1 395 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 HIPK1Q86Z02 1210 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 C8orf59Q8N0T1 100 aaPredicted RBP14.86□□□□□ -0.03
USH1C-207ENST00000527720 C10orf111Q8N326 155 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 CELF5Q8N6W0 485 aaKnown RBP14.86□□□□□ -0.03
USH1C-207ENST00000527720 CNDP2Q96KP4 475 aaKnown RBP14.86□□□□□ -0.03
USH1C-207ENST00000527720 TOR3AQ9H497 397 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 IFT80Q9P2H3 777 aaPredicted RBP14.86□□□□□ -0.03
USH1C-207ENST00000527720 PRRC2BQ5JSZ5 2229 aaKnown RBP14.86□□□□□ -0.03
USH1C-207ENST00000527720 KRT87PA6NCN2 255 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 HOXC11O43248 304 aaPredicted RBP14.86□□□□□ -0.03
USH1C-207ENST00000527720 EPN2O95208 641 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 PRNPP04156 253 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 ADH5P11766 374 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 IMPA1P29218 277 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 NTHL1P78549 312 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 ZIK1Q3SY52 487 aaPredicted RBP14.86□□□□□ -0.03
USH1C-207ENST00000527720 BCL7AQ4VC05 210 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 C10orf62Q5T681 223 aaPredicted RBP14.86□□□□□ -0.03
USH1C-207ENST00000527720 AP1ARQ63HQ0 302 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 TMEM220Q6QAJ8 160 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 DTD2Q96FN9 168 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 COQ10AQ96MF6 247 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 PANX1Q96RD7 426 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 SPATA9Q9BWV2 254 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 ZCCHC2Q9C0B9 1178 aaKnown RBP14.86□□□□□ -0.03
USH1C-207ENST00000527720 ING2Q9H160 280 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 FAM118AQ9NWS6 357 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 C3orf18Q9UK00 162 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 RWDD3Q9Y3V2 267 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 HCFC2Q9Y5Z7 792 aa14.86□□□□□ -0.03
USH1C-207ENST00000527720 PDE4DIPQ5VU43 2346 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 CLIC1O00299 241 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 NPC1O15118 1278 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 ADH1CP00326 375 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 CYP17A1P05093 508 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 MYCLP1P12525 358 aaPredicted RBP14.85□□□□□ -0.03
USH1C-207ENST00000527720 COX7A2P14406 83 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 EPCAMP16422 314 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 PREPP48147 710 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 WNT3P56703 355 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 VAC14Q08AM6 782 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 ZNF658BQ4V348 819 aaPredicted RBP14.85□□□□□ -0.03
USH1C-207ENST00000527720 SPIN4Q56A73 249 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 ZC3H12BQ5HYM0 836 aaKnown RBP14.85□□□□□ -0.03
USH1C-207ENST00000527720 CES5AQ6NT32 575 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 ZNF773Q6PK81 442 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 ZNF765Q7L2R6 523 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 GPR155Q7Z3F1 870 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 CAMKMTQ7Z624 323 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 GRASPQ7Z6J2 395 aaPredicted RBP14.85□□□□□ -0.03
USH1C-207ENST00000527720 CLVS1Q8IUQ0 354 aaPredicted RBP14.85□□□□□ -0.03
USH1C-207ENST00000527720 OR7A2PQ8NGA2 310 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 GFM2Q969S9 779 aaKnown RBP14.85□□□□□ -0.03
USH1C-207ENST00000527720 ISOC1Q96CN7 298 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 MED8Q96G25 268 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 OR4K3Q96R72 315 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 PKP4Q99569 1192 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 EBPLQ9BY08 206 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 MTG2Q9H4K7 406 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 SGK2Q9HBY8 427 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 AASDHPPTQ9NRN7 309 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 MAGED1Q9Y5V3 778 aaPredicted RBP14.85□□□□□ -0.03
USH1C-207ENST00000527720 GMEB1Q9Y692 573 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 TCF20Q9UGU0 1960 aaKnown RBP14.85□□□□□ -0.03
USH1C-207ENST00000527720 MUC22E2RYF6 1773 aaPredicted RBP14.85□□□□□ -0.03
USH1C-207ENST00000527720 MAGEB17A8MXT2 336 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 CPNE6O95741 557 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 SLC16A8O95907 504 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 CEBPBP17676 345 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 WEE1P30291 646 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 DCTP40126 519 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 LRRC74AQ0VAA2 488 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 GRIN2CQ14957 1233 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 CPZQ66K79 652 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 SPESP1Q6UW49 350 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 HDAC2Q92769 488 aaKnown RBP14.85□□□□□ -0.03
USH1C-207ENST00000527720 REPS1Q96D71 796 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 PHF12Q96QT6 1004 aa14.85□□□□□ -0.03
USH1C-207ENST00000527720 MTERF1Q99551 399 aaKnown RBP14.85□□□□□ -0.03
USH1C-207ENST00000527720 DOK1Q99704 481 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms