RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 SLC6A20Q9NP91 592 aa16.65■□□□□ 0.26
LTBP3-208ENST00000527339 EURLQ9NYK6 297 aa16.65■□□□□ 0.26
LTBP3-208ENST00000527339 CTNNAL1Q9UBT7 734 aa16.65■□□□□ 0.26
LTBP3-208ENST00000527339 IKZF3Q9UKT9 509 aa16.65■□□□□ 0.26
LTBP3-208ENST00000527339 OR2A25A4D2G3 310 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 NPEPPSL1A6NEC2 478 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 H3BMH7 237 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 OR2B3O76000 313 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 NTRK1P04629 796 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 ABHD2P08910 425 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 CCNYL3P0C7X3 344 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 CCDC166P0CW27 439 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 TNFRSF8P28908 595 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 CRABP2P29373 138 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 PMS2P54278 862 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 CDKL1Q00532 357 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 PRAMEF13Q5VWM6 474 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 RAPH1Q70E73 1250 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 CCDC91Q7Z6B0 441 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 CMC1Q7Z7K0 106 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 MCATQ8IVS2 390 aaKnown RBP16.64■□□□□ 0.25
LTBP3-208ENST00000527339 SLC44A1Q8WWI5 657 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 KIAA1143Q96AT1 154 aaPredicted RBP16.64■□□□□ 0.25
LTBP3-208ENST00000527339 FBXL8Q96CD0 374 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 RNF31Q96EP0 1072 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 UBXN10Q96LJ8 280 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 LRFN5Q96NI6 719 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 EFHD1Q9BUP0 239 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 ATG10Q9H0Y0 220 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 ACTR5Q9H9F9 607 aaPredicted RBP16.64■□□□□ 0.25
LTBP3-208ENST00000527339 UTP6Q9NYH9 597 aaKnown RBP16.64■□□□□ 0.25
LTBP3-208ENST00000527339 PADI1Q9ULC6 663 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 OARD1Q9Y530 152 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 PCDHGA4Q9Y5G9 962 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 IKBKGQ9Y6K9 419 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 AP1M2Q9Y6Q5 423 aa16.64■□□□□ 0.25
LTBP3-208ENST00000527339 FER1L5A0AVI2 2057 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 UTP20O75691 2785 aaKnown RBP16.63■□□□□ 0.25
LTBP3-208ENST00000527339 LOC101059948A0A1B0GTJ6 334 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 SUV39H1O43463 412 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 GUCA1CO95843 209 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 INHBAP08476 426 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 HBQ1P09105 142 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 FAM153BP0C7A2 387 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 SLC35E2BP0CK96 405 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 SLC26A3P40879 764 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 ATP6V0D1P61421 351 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 YBX1P67809 324 aaKnown RBP16.63■□□□□ 0.25
LTBP3-208ENST00000527339 NAE1Q13564 534 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 BMPR2Q13873 1038 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 TSNQ15631 228 aaKnown RBP16.63■□□□□ 0.25
LTBP3-208ENST00000527339 TBR1Q16650 682 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 FAM153CQ494X1 144 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 MROH9Q5TGP6 573 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 PRAMEF17Q5VTA0 474 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 CAPN13Q6MZZ7 669 aaPredicted RBP16.63■□□□□ 0.25
LTBP3-208ENST00000527339 TLDC1Q6P9B6 456 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 FRA10AC1Q70Z53 315 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 RNF44Q7L0R7 432 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 OR56A3Q8NH54 315 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.63■□□□□ 0.25
LTBP3-208ENST00000527339 CLIP3Q96DZ5 547 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 PAFAH2Q99487 392 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 PLCD4Q9BRC7 762 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 SGPP1Q9BX95 441 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 TXLNGYQ9BZA5 131 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 FAM117AQ9C073 453 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 SLC7A5P2Q9GIP4 190 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 LHX9Q9NQ69 397 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 ABCF3Q9NUQ8 709 aa16.63■□□□□ 0.25
LTBP3-208ENST00000527339 IGKV1-8A0A0C4DH67 115 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 HMX2A2RU54 273 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 ZSCAN9O15535 394 aaPredicted RBP16.62■□□□□ 0.25
LTBP3-208ENST00000527339 RIPK2O43353 540 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 ZNF749O43361 778 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 SRPX2O60687 465 aaPredicted RBP16.62■□□□□ 0.25
LTBP3-208ENST00000527339 CTSVO60911 334 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 SLU7O95391 586 aaKnown RBP16.62■□□□□ 0.25
LTBP3-208ENST00000527339 KLK3P07288 261 aaPredicted RBP16.62■□□□□ 0.25
LTBP3-208ENST00000527339 ANXA5P08758 320 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 LIFP15018 202 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 CD1DP15813 335 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 HRH2P25021 359 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 SERPINB9P50453 376 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 GPS2Q13227 327 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 CSHL1Q14406 222 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 TCTE1Q5JU00 501 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 COLEC12Q5KU26 742 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 ZNF425Q6IV72 752 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 LCTLQ6UWM7 567 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 TAOK1Q7L7X3 1001 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 TBC1D1Q86TI0 1168 aaPredicted RBP16.62■□□□□ 0.25
LTBP3-208ENST00000527339 PAQR7Q86WK9 346 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 GSPT2Q8IYD1 628 aaKnown RBP16.62■□□□□ 0.25
LTBP3-208ENST00000527339 ZSCAN1Q8NBB4 408 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 SLC38A9Q8NBW4 561 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 UHMK1Q8TAS1 419 aaKnown RBP16.62■□□□□ 0.25
LTBP3-208ENST00000527339 ZNF285Q96NJ3 590 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 ZFYVE21Q9BQ24 234 aa16.62■□□□□ 0.25
LTBP3-208ENST00000527339 SELENOSQ9BQE4 189 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms