RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 COX15Q7KZN9 410 aa12.8□□□□□ -0.36
CAPN1-207ENST00000527189 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.8□□□□□ -0.36
CAPN1-207ENST00000527189 ZNF552Q9H707 407 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-207ENST00000527189 FBXO6Q9NRD1 293 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-207ENST00000527189 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.8□□□□□ -0.36
CAPN1-207ENST00000527189 CRYBG3Q68DQ2 2970 aa12.8□□□□□ -0.36
CAPN1-207ENST00000527189 CCDC88CQ9P219 2028 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 C2CD3Q4AC94 2353 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 LOC105369274A0A096LPK9 316 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 LOC102723532A0A0G2JNH3 316 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 KRT87PA6NCN2 255 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 E7ENX8 843 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 PRPF4O43172 522 aaKnown RBP eCLIP12.79□□□□□ -0.362e-6■■■□□ 17.7
CAPN1-207ENST00000527189 HAUS5O94927 633 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 SLC16A8O95907 504 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 ERVK-10P10266 1014 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 EZRP15311 586 aaKnown RBP12.79□□□□□ -0.36
CAPN1-207ENST00000527189 PGAM1P18669 254 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 HRH2P25021 359 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 SLC1A2P43004 574 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 OR1D4P47884 311 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 TAP2Q03519 686 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 OCA2Q04671 838 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 INPP5JQ15735 1006 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-207ENST00000527189 PRTGQ2VWP7 1150 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 HSP90AA5PQ58FG0 334 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 GARNL3Q5VVW2 1013 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 ICE2Q659A1 982 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 ZNF425Q6IV72 752 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 SUSD1Q6UWL2 747 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 PAQR7Q86WK9 346 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 OR4N4Q8N0Y3 316 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 AGGF1Q8N302 714 aaeCLIP12.79□□□□□ -0.36
CAPN1-207ENST00000527189 Q8NA96 180 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 GIMAP7Q8NHV1 300 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 ZNF480Q8WV37 535 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 SLC30A3Q99726 388 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 EBNA1BP2Q99848 306 aaKnown RBP12.79□□□□□ -0.36
CAPN1-207ENST00000527189 AARSD1Q9BTE6 412 aaKnown RBP12.79□□□□□ -0.36
CAPN1-207ENST00000527189 ACAT2Q9BWD1 397 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 ZNF282Q9UDV7 671 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-207ENST00000527189 PCYOX1Q9UHG3 505 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 CDC23Q9UJX2 597 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 B3GNT3Q9Y2A9 372 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 ITPR3Q14573 2671 aa12.79□□□□□ -0.36
CAPN1-207ENST00000527189 IGLV3-12A0A075B6K2 115 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 H0YGG7 62 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 SMAPO00193 183 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 SOCS6O14544 535 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 DNALI1O14645 258 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-207ENST00000527189 PCDH17O14917 1159 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 EIF2S1P05198 315 aaKnown RBP12.78□□□□□ -0.36
CAPN1-207ENST00000527189 ARF3P61204 181 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-207ENST00000527189 SPANXN3Q5MJ09 141 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 PRAMEF13Q5VWM6 474 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 KIRREL2Q6UWL6 708 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 KIAA0408Q6ZU52 694 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 SYDE1Q6ZW31 735 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-207ENST00000527189 GALNT7Q86SF2 657 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 KCNMB4Q86W47 210 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 ZADH2Q8N4Q0 377 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 C2CD4AQ8NCU7 369 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-207ENST00000527189 STT3BQ8TCJ2 826 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 CD200R1Q8TD46 325 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 MCOLN3Q8TDD5 553 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-207ENST00000527189 OR2A5Q96R48 311 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 GPR21Q99679 349 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 PCBD2Q9H0N5 130 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 SLC6A20Q9NP91 592 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 TAS2R13Q9NYV9 303 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 ASIC3Q9UHC3 531 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 TAC3Q9UHF0 121 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 TSR3Q9UJK0 312 aaKnown RBP12.78□□□□□ -0.36
CAPN1-207ENST00000527189 HS3ST3B1Q9Y662 390 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 CSMD1Q96PZ7 3565 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 PCSK5Q92824 1860 aa12.78□□□□□ -0.36
CAPN1-207ENST00000527189 CELSR2Q9HCU4 2923 aa12.77□□□□□ -0.36
CAPN1-207ENST00000527189 RP1L1Q8IWN7 2480 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-207ENST00000527189 IGKV1-8A0A0C4DH67 115 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 ZGLP1P0C6A0 271 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 ATXN8OSP0DMR3 200 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 RGS4P49798 205 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 YBX1P67809 324 aaKnown RBP12.77□□□□□ -0.37
CAPN1-207ENST00000527189 CUL1Q13616 776 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 RAPSNQ13702 412 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 FAM53BQ14153 422 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 CRYMQ14894 314 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 RBBP7Q16576 425 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 TUBB8Q3ZCM7 444 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 PLEKHN1Q494U1 663 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-207ENST00000527189 IRAK1BP1Q5VVH5 260 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 IGFL2Q6UWQ7 119 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 UBE2R2Q712K3 238 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-207ENST00000527189 CNTN4Q8IWV2 1026 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 LRRC56Q8IYG6 542 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-207ENST00000527189 IQCKQ8N0W5 287 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 RERGQ96A58 199 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-207ENST00000527189 MIEF2Q96C03 454 aa12.77□□□□□ -0.37
CAPN1-207ENST00000527189 CABS1Q96KC9 395 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms