RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 EPHA2P29317 976 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 DNAJA1P31689 397 aaKnown RBP11.31□□□□□ -0.6
LINC01001-201ENST00000526704 KIR3DL1P43629 444 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 WNT3P56703 355 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 CXCR4P61073 352 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 LMAN2Q12907 356 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 OXA1LQ15070 435 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 SMN1Q16637 294 aaKnown RBP11.31□□□□□ -0.6
LINC01001-201ENST00000526704 UGT8Q16880 541 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 DUOXA1Q1HG43 343 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 VMACQ2NL98 169 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 NOXRED1Q6NXP6 359 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 CYP2U1Q7Z449 544 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 PTOV1Q86YD1 416 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 TCAIMQ8N3R3 496 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 MFSD4AQ8N468 514 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 ARL14EPQ8N8R7 260 aaPredicted RBP11.31□□□□□ -0.6
LINC01001-201ENST00000526704 HSH2DQ96JZ2 352 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 COPS8Q99627 209 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 ALOXE3Q9BYJ1 711 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 ZNF334Q9HCZ1 680 aaPredicted RBP11.31□□□□□ -0.6
LINC01001-201ENST00000526704 NDRG4Q9ULP0 352 aaKnown RBP11.31□□□□□ -0.6
LINC01001-201ENST00000526704 ERVK-11Q9UQG0 969 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 TPRKBQ9Y3C4 175 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 GMPPBQ9Y5P6 360 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 IGLV3-16A0A075B6K0 115 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 EVPLLA8MZ36 301 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 CLIC1O00299 241 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 EIF3FO00303 357 aaPredicted RBP11.31□□□□□ -0.6
LINC01001-201ENST00000526704 FPGTO14772 594 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 FADS2O95864 444 aaKnown RBP11.31□□□□□ -0.6
LINC01001-201ENST00000526704 C8GP07360 202 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 LHCGRP22888 699 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 SERPINA4P29622 427 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 LSM3P62310 102 aaKnown RBP11.31□□□□□ -0.6
LINC01001-201ENST00000526704 HSPA14Q0VDF9 509 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 CLCA4Q14CN2 919 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 MAD2L1BPQ15013 274 aaPredicted RBP11.31□□□□□ -0.6
LINC01001-201ENST00000526704 SYT6Q5T7P8 510 aaPredicted RBP11.31□□□□□ -0.6
LINC01001-201ENST00000526704 CCDC81Q6ZN84 652 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 CCDC71Q8IV32 467 aaPredicted RBP11.31□□□□□ -0.6
LINC01001-201ENST00000526704 TAMM41Q96BW9 452 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 MROQ9BYG7 248 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 NECTIN3Q9NQS3 549 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 SIRT5Q9NXA8 310 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 PDP1Q9P0J1 537 aaPredicted RBP11.31□□□□□ -0.6
LINC01001-201ENST00000526704 DAPK2Q9UIK4 370 aa11.31□□□□□ -0.6
LINC01001-201ENST00000526704 PCM1Q15154 2024 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 SERTM1A2A2V5 107 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 KPNA4O00629 521 aaPredicted RBP11.3□□□□□ -0.6
LINC01001-201ENST00000526704 NUAK1O60285 661 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 SCN2BO60939 215 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 ADAM23O75077 832 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 JRKO75564 520 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 ITPKAP23677 461 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 CD70P32970 193 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 KRT20P35900 424 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 TRPC1P48995 793 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 PTPN5P54829 565 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 VBP1P61758 197 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 TRIM16LQ309B1 348 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 FRG2Q64ET8 278 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 TXNDC8Q6A555 127 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 KIAA1841Q6NSI8 718 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 TPRG1Q6ZUI0 275 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 DNAJB7Q7Z6W7 309 aaPredicted RBP11.3□□□□□ -0.6
LINC01001-201ENST00000526704 P2RY8Q86VZ1 359 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 HORMAD1Q86X24 394 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 TTC29Q8NA56 475 aaPredicted RBP11.3□□□□□ -0.6
LINC01001-201ENST00000526704 CSGALNACT1Q8TDX6 532 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 SKA2Q8WVK7 121 aaPredicted RBP11.3□□□□□ -0.6
LINC01001-201ENST00000526704 ASB11Q8WXH4 323 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 GLMNQ92990 594 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 FRG2BQ96QU4 278 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 PANX1Q96RD7 426 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 P2RY13Q9BPV8 354 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 DPH2Q9BQC3 489 aaPredicted RBP11.3□□□□□ -0.6
LINC01001-201ENST00000526704 TSEN34Q9BSV6 310 aaKnown RBP11.3□□□□□ -0.6
LINC01001-201ENST00000526704 NMRK2Q9NPI5 230 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 ITGB1BP2Q9UKP3 347 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 TMPRSS11EQ9UL52 423 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 SLC22A14Q9Y267 594 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 EPN2O95208 641 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 GPX2P18283 190 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 PSMB9P28065 219 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 KDELR2P33947 212 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 PPP3CCP48454 512 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 ALDH7A1P49419 539 aaKnown RBP11.3□□□□□ -0.6
LINC01001-201ENST00000526704 STK19P49842 368 aaPredicted RBP11.3□□□□□ -0.6
LINC01001-201ENST00000526704 HNMTP50135 292 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 ITGA1P56199 1179 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 IFITM3Q01628 133 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 PTSQ03393 145 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 VEPH1Q14D04 833 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 TMEM236Q5W0B7 351 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 LINC00299Q6ZSB3 139 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 CBLL1Q75N03 491 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 SNX29P2Q8IUI4 249 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 CLECL1Q8IZS7 167 aa11.3□□□□□ -0.6
LINC01001-201ENST00000526704 OR2AP1Q8NGE2 309 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms