RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 SMYD2Q9NRG4 433 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 CUEDC1Q9NWM3 386 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 MOCS1Q9NZB8 636 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 ZFATQ9P243 1243 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 TP53TG5Q9Y2B4 290 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 MAU2Q9Y6X3 613 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 PCSK5Q92824 1860 aa12.29□□□□□ -0.44
TRAPPC4-205ENST00000525079 A0A1B0GX78 115 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 HYKKA2RU49 373 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 MKRN2OSH3BPM6 223 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 NDC80O14777 642 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 DSCR3O14972 297 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 URI1O94763 535 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 CCNDBP1O95273 360 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 TSPAN12O95859 305 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 STATHP02808 62 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 FOLR3P41439 243 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 PLTPP55058 493 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 ATP1A4Q13733 1029 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 FRG1Q14331 258 aaKnown RBP12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 ZNF460Q14592 562 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 FAM214AQ32MH5 1076 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 LACTB2Q53H82 288 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 ZNF425Q6IV72 752 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 LRRC8EQ6NSJ5 796 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 MRPL14Q6P1L8 145 aaKnown RBP12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 TMEM207Q6UWW9 146 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 SHISA6Q6ZSJ9 500 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 APLFQ8IW19 511 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 ZNF592Q92610 1267 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 CCDC138Q96M89 665 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 C17orf62Q9BQA9 187 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 DHRS4Q9BTZ2 278 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 PARVBQ9HBI1 364 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 ACSS2Q9NR19 701 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 IKZF3Q9UKT9 509 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 PADI2Q9Y2J8 665 aa12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 UTP11Q9Y3A2 253 aaKnown RBP12.28□□□□□ -0.44
TRAPPC4-205ENST00000525079 FAM95CA0A1B0GW59 222 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 FITM1A5D6W6 292 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 A6NL46 340 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 CXorf49A8MYA2 514 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 H7BY64 318 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 J3QKU1 62 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 MASP2O00187 686 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 HAT1O14929 419 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 SLC16A5O15375 505 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 SUV39H1O43463 412 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 PDGFAP04085 211 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 HIST1H2AGP0C0S8 130 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 HIST1H2ADP20671 130 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 TBPL1P62380 186 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 SLC7A5Q01650 507 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 NAE1Q13564 534 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 NAA25Q14CX7 972 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 PRAMEF13Q5VWM6 474 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 AGTRAPQ6RW13 159 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 COX15Q7KZN9 410 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 OVCH1Q7RTY7 1134 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 ZC3HC1Q86WB0 502 aaKnown RBP12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 CCDC25Q86WR0 208 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 RAB43Q86YS6 212 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 OR2Y1Q8NGV0 311 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 HIST1H2AHQ96KK5 128 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 PRAP1Q96NZ9 151 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 HIST1H2AJQ99878 128 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 H2AFJQ9BTM1 129 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 RAB17Q9H0T7 212 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 CCDC177Q9NQR7 707 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 ARL15Q9NXU5 204 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 ANKMY1Q9P2S6 941 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 CDC23Q9UJX2 597 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 CORO1CQ9ULV4 474 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 SH2B3Q9UQQ2 575 aa12.27□□□□□ -0.45
TRAPPC4-205ENST00000525079 COL6A6A6NMZ7 2263 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 ZIC2O95409 532 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 GUCA1CO95843 209 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 UMODP07911 640 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 PIM1P11309 404 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 TAS2R39P59534 338 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 ABATP80404 500 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 CKAP4Q07065 602 aaKnown RBP12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 CBLBQ13191 982 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 SP140Q13342 867 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 SSPNQ14714 243 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 NKG7Q16617 165 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 ZXDCQ2QGD7 858 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 HKDC1Q2TB90 917 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 PRTGQ2VWP7 1150 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 YOD1Q5VVQ6 348 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 ZDHHC24Q6UX98 284 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 ATG14Q6ZNE5 492 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 ASB18Q6ZVZ8 466 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 ZNF572Q7Z3I7 529 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 SLC26A11Q86WA9 606 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 CSNK1A1LQ8N752 337 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 FBXO25Q8TCJ0 367 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 COL26A1Q96A83 441 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 PTERQ96BW5 349 aa12.26□□□□□ -0.45
TRAPPC4-205ENST00000525079 PYCR2Q96C36 320 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms